RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TECTAO75443 2155 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 TMEM221A6NGB7 291 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ANKRD66B4E2M5 251 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 M0R296 226 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 USP12O75317 370 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ADH1BP00325 375 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 IL1BP01584 269 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 C5AR1P21730 350 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ITGB7P26010 798 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 GRIA1P42261 906 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ABL2P42684 1182 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 MAGEA3P43357 314 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SLCO1A2P46721 670 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 GRIA4P48058 902 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SUOXP51687 545 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 CLCN5P51795 746 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 CST6Q15828 149 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SIRPB2Q5JXA9 342 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SYCP2LQ5T4T6 812 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ARMC3Q5W041 872 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 IRGCQ6NXR0 463 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KIRREL3Q8IZU9 778 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 PPP1R16AQ96I34 528 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 TRAPPC9Q96Q05 1148 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 CCDC28BQ9BUN5 200 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 HDAC8Q9BY41 377 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 PHACTR1Q9C0D0 580 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 MKRN2Q9H000 416 aaKnown RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 POLMQ9NP87 494 aaPredicted RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SAR1AQ9NR31 198 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KPNA3O00505 521 aaPredicted RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 PRPF4O43172 522 aaKnown RBP eCLIP12.32□□□□□ -0.449e-7■□□□□ 11.2
SCARB1-204ENST00000535005 PEX11AO75192 247 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 TPBGLP0DKB5 382 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 TIMP2P16035 220 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 AOC1P19801 751 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 CHRNA4P43681 627 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 NPY2RP49146 381 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KLC1Q07866 573 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 MSLNQ13421 630 aaPredicted RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 OLIG2Q13516 323 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 RASA2Q15283 850 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KDELC2Q7Z4H8 507 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 TMPRSS6Q8IU80 811 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 FLCNQ8NFG4 579 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 OR52K1Q8NGK4 314 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 PDCD6IPQ8WUM4 868 aaKnown RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 FAM131CQ96AQ9 280 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 ARRDC3Q96B67 414 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 MCCC1Q96RQ3 725 aaPredicted RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SRPK1Q96SB4 655 aaKnown RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 APOL2Q9BQE5 337 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 PITPNM3Q9BZ71 974 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 DCLRE1BQ9H816 532 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 STOML1Q9UBI4 398 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 LNPEPQ9UIQ6 1025 aa12.32□□□□□ -0.44
SCARB1-204ENST00000535005 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
SCARB1-204ENST00000535005 A0A0J9YYE9 177 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 C16orf96A6NNT2 1141 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 E7ESA3 106 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 PAPSS2O95340 614 aaPredicted RBP12.31□□□□□ -0.44
SCARB1-204ENST00000535005 PDGFBP01127 241 aaPredicted RBP12.31□□□□□ -0.44
SCARB1-204ENST00000535005 TRBC1P01850 177 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 TAC1P20366 129 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 PSMD8P48556 350 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 ARL4CP56559 192 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 BIRC2Q13490 618 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 UGP2Q16851 508 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 LONRF1Q17RB8 773 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 PARS2Q7L3T8 475 aaKnown RBP12.31□□□□□ -0.44
SCARB1-204ENST00000535005 TDRPQ86YL5 185 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 GALNT15Q8N3T1 639 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 SLC25A41Q8N5S1 370 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
SCARB1-204ENST00000535005 RAB7BQ96AH8 199 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 RMDN1Q96DB5 314 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 SCRN2Q96FV2 425 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 MRGPRX1Q96LB2 322 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 RMDN2Q96LZ7 410 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
SCARB1-204ENST00000535005 UPK3BL1B0FP48 263 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 UPK3BL2E5RIL1 263 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 GOLGA8MH3BSY2 632 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SKAP2O75563 359 aaPredicted RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DNTTP04053 509 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DCNP07585 359 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 GABRG2P18507 467 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 NFKBIAP25963 317 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 EPHB1P54762 984 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SH3BGRP55822 239 aaPredicted RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 PPARDQ03181 441 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms