RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LINC00032P0C843 101 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 CRYBB1P53674 252 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-226ENST00000533820 SH3BP2P78314 561 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 FUT11Q495W5 492 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 EFHD1Q9BUP0 239 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 TRPV5Q9NQA5 729 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 FAM105AQ9NUU6 356 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 PLK2Q9NYY3 685 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 CDH9Q9ULB4 789 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 ST3GAL5Q9UNP4 418 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 FNDC3AQ9Y2H6 1198 aaKnown RBP19.34■□□□□ 0.69
CAPN1-226ENST00000533820 FAM32AQ9Y421 112 aaKnown RBP19.34■□□□□ 0.69
CAPN1-226ENST00000533820 A0A1W2PQ67 120 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 NME4O00746 187 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 IRAK2O43187 625 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 PRSS56P0CW18 603 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 MTHFD1P11586 935 aaKnown RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 DNAJB13P59910 316 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 OFCC1Q8IZS5 231 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 PTGR2Q8N8N7 351 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CYGBQ8WWM9 190 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 HAUS8Q9BT25 410 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CD300AQ9UGN4 299 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 UBXN8O00124 270 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CACNG3O60359 315 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 HAPLN1P10915 354 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 HOXD8P13378 290 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 GRIK1P39086 918 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 SERPINH1P50454 418 aaKnown RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 C16orf72Q14CZ0 275 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 RPS6KA2Q15349 733 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CARM1Q86X55 608 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CLVS1Q8IUQ0 354 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 OR13J1Q8NGT2 312 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 OR10T2Q8NGX3 314 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 SPATA17Q96L03 361 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 TBATAQ96M53 351 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 RGS18Q9NS28 235 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 KIAA1522Q9P206 1035 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-226ENST00000533820 CPA4Q9UI42 421 aa19.33■□□□□ 0.69
CAPN1-226ENST00000533820 A0A1B0GTL3 188 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 H3BNH8 94 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 NCK1P16333 377 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 PCSK1P29120 753 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 OXTRP30559 389 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 MAPK10P53779 464 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 LPIN1Q14693 890 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 CCL14Q16627 93 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 HABP4Q5JVS0 413 aaKnown RBP19.33■□□□□ 0.68
CAPN1-226ENST00000533820 FIBCD1Q8N539 461 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 DNAJB14Q8TBM8 379 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 TRPC4APQ8TEL6 797 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 TUBGCP3Q96CW5 907 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 RANBP9Q96S59 729 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 CATSPERBQ9H7T0 1116 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 DUS2Q9NX74 493 aaKnown RBP19.33■□□□□ 0.68
CAPN1-226ENST00000533820 DNAJC15Q9Y5T4 150 aa19.33■□□□□ 0.68
CAPN1-226ENST00000533820 TCRBV3S1A0A5B6 114 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 E9PAM4 449 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 PIP5K1BO14986 540 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ITGB1P05556 798 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 RBP1P09455 135 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 NEK2P51955 445 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ARPC4P59998 168 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 PDCD4Q53EL6 469 aaKnown RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 UNC50Q53HI1 259 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ISCA2Q86U28 154 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 CIR1Q86X95 450 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 SDR16C5Q8N3Y7 309 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 DCBLD1Q8N8Z6 715 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 BLOC1S5Q8TDH9 187 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 GPR152Q8TDT2 470 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 NMUR1Q9HB89 426 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 TIMMDC1Q9NPL8 285 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ATAD3AQ9NVI7 634 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 SMOXQ9NWM0 555 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 TMEM181Q9P2C4 612 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 EBF1Q9UH73 591 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 N6AMT1Q9Y5N5 214 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 FADS3Q9Y5Q0 445 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 NCF1BA6NI72 391 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 NCF1CA8MVU1 366 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 H3BMM5 538 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 MYCLP1P12525 358 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 NCF1P14598 390 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ZNF23P17027 643 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 CAPN3P20807 821 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 ANKDD1AQ495B1 522 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 TTC33Q6PID6 262 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 LARP4Q71RC2 724 aaKnown RBP eCLIP19.32■□□□□ 0.684e-7■□□□□ 10.9
CAPN1-226ENST00000533820 CHST15Q7LFX5 561 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-226ENST00000533820 CILP2Q8IUL8 1156 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 OR2T34Q8NGX1 318 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 OR2T3Q8NH03 318 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 VPS33AQ96AX1 596 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 TPK1Q9H3S4 243 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 RRN3Q9NYV6 651 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 MAP10Q9P2G4 905 aa19.32■□□□□ 0.68
CAPN1-226ENST00000533820 HS3ST4Q9Y661 456 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms