RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SELENOMQ8WWX9 145 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 FAM120BQ96EK7 910 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 PCDHB18PQ96TA0 734 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 BPIFA1Q9NP55 256 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 THAP1Q9NVV9 213 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 FZD10Q9ULW2 581 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 OTCP00480 354 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 HK2P52789 917 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ATP13A5Q4VNC0 1218 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ARMCX4Q5H9R4 360 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CRTC3Q6UUV7 619 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CENPLQ8N0S6 344 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 VPS33AQ96AX1 596 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 OTULINQ96BN8 352 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 PCYT2Q99447 389 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 BTBD10Q9BSF8 475 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 PCBD2Q9H0N5 130 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TRIT1Q9H3H1 467 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 RMI1Q9H9A7 625 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 IMP3Q9NV31 184 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 RASGRP1O95267 797 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 IFNA16P05015 189 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 DHPSP49366 369 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 RAB10P61026 200 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 INCA1Q0VD86 236 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 XKR4Q5GH76 650 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 UNC5AQ6ZN44 842 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 KIAA0408Q6ZU52 694 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TMC3Q7Z5M5 1100 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM110Q86TL2 294 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ZSCAN18Q8TBC5 510 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 AGAP11Q8TF27 550 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 AENQ8WTP8 325 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CD101Q93033 1021 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 HDAC10Q969S8 669 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 AIF1LQ9BQI0 150 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM120AQ9BXJ8 343 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 GKN1Q9NS71 199 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 PIRO00625 290 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ERN1O75460 977 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 MFN2O95140 757 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 VNN1O95497 513 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CHRNA1P02708 482 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SSTR1P30872 391 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TRIM25Q14258 630 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CST9Q5W186 159 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CES3Q6UWW8 571 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 B3GNT6Q6ZMB0 384 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CCDC185Q8N715 623 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 BTBD1Q9H0C5 482 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ZCWPW1Q9H0M4 648 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 VRTNQ9H8Y1 702 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 IL1RL2Q9HB29 575 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 GMEB2Q9UKD1 530 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 MRTO4Q9UKD2 239 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 NUP98P52948 1817 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SRRM3A6NNA2 597 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC28A1O00337 649 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 LATS1O95835 1130 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 CNPP09543 421 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF23P17027 643 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 JAK1P23458 1154 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SOX6P35712 828 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 SOX11P35716 441 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 GPD2P43304 727 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 AQP5P55064 265 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TEAD2Q15562 447 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 R3HCC1LQ7Z5L2 792 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 FNDC5Q8NAU1 212 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 ERLEC1Q96DZ1 483 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 NELL2Q99435 816 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 MRPL57Q9BQC6 102 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 FBXO6Q9NRD1 293 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
AMBRA1-211ENST00000533727 MFSD11O43934 449 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ADH1BP00325 375 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 GSNP06396 782 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CAPN1P07384 714 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 HADHBP55084 474 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 ATP13A4Q4VNC1 1196 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 OLFML1Q6UWY5 402 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 CHSY3Q70JA7 882 aa11.25□□□□□ -0.61
AMBRA1-211ENST00000533727 KRT73Q86Y46 540 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms