RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 AP1M1Q9BXS5 423 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 PCDH18Q9HCL0 1135 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 AKAP7Q9P0M2 348 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZFC3H1O60293 1989 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 hCG_1818297A0A087WSY0 165 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 C9orf172C9J069 976 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 RAD51BO15315 384 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 CAPN5O15484 640 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 MTSS1O43312 755 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 VPS4BO75351 444 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 IL4RP24394 825 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 PTPN7P35236 360 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 RECQLP46063 649 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 PFN3P60673 137 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 C2orf54Q08AI8 447 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 KLRB1Q12918 225 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 FGL2Q14314 439 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 PPP2R5EQ16537 467 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 TFDP3Q5H9I0 405 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 RABGAP1LQ5R372 815 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAXCQ5TGI0 409 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 KAZNQ674X7 775 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 PYROXD2Q8N2H3 581 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 FSTL5Q8N475 847 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 IL22RA1Q8N6P7 574 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 MYRIPQ8NFW9 859 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 MAIP1Q8WWC4 291 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 NTAN1Q96AB6 310 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 TKTL2Q9H0I9 626 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 ANLNQ9NQW6 1124 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 VPS4AQ9UN37 437 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 AP4E1Q9UPM8 1137 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 SPTBN1Q01082 2364 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 NBASA2RRP1 2371 aa11.38□□□□□ -0.59
TRAPPC4-213ENST00000533149 SCN8AQ9UQD0 1980 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 I6L893 689 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 TJP3O95049 919 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ALPIP09923 528 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 TSHRP16473 764 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CCR1P32246 355 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ETV5P41161 510 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 BLKP51451 505 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 NEK3P51956 506 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 AIF1P55008 147 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ADCY2Q08462 1091 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 DPYSL3Q14195 570 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ELOCQ15369 112 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 DPYSL2Q16555 572 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 LACTB2Q53H82 288 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 PPP6R3Q5H9R7 873 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFHC2Q5JST6 749 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 BRMS1LQ5PSV4 323 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CXorf57Q6NSI4 855 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 RFX6Q8HWS3 928 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CCNJLQ8IV13 435 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 MMGT1Q8N4V1 131 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 PRELID2Q8N945 189 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 KYQ8NBH2 561 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 OR2A12Q8NGT7 310 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 JPH3Q8WXH2 748 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 NKD1Q969G9 470 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ALG14Q96F25 216 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ABHD17AQ96GS6 310 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 RNF157Q96PX1 679 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 KLF6Q99612 283 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 C1QTNF2Q9BXJ5 285 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 MAK16Q9BXY0 300 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CLPBQ9H078 707 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CDH19Q9H159 772 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 TCEAL2Q9H3H9 227 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 CUEDC1Q9NWM3 386 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 ARHGEF38Q9NXL2 777 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 SIRPGQ9P1W8 387 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLC12A6Q9UHW9 1150 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 XPO7Q9UIA9 1087 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 VPS28Q9UK41 221 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFR3BQ9Y2G0 817 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 SNX10Q9Y5X0 201 aa11.37□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFCAB8A8MWE9 144 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 KCNU1A8MYU2 1149 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 AP1G1O43747 822 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 CST8O60676 142 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLC2A3P11169 496 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms