RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TECPR1Q7Z6L1 1165 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 HEATR4Q86WZ0 1026 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 TMTC1Q8IUR5 882 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 ARL10Q8N8L6 244 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 FAM46DQ8NEK8 389 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 AP2M1Q96CW1 435 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 PANX2Q96RD6 677 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 SEPT10Q9P0V9 454 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 CD84Q9UIB8 345 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 EPN1Q9Y6I3 576 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-204ENST00000532550 ZZEF1O43149 2961 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 A0A0U1RQS6 177 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 PSTPIP1O43586 416 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 CSO75390 466 aaKnown RBP17.2■□□□□ 0.34
PHRF1-204ENST00000532550 ZRANB2O95218 330 aaKnown RBP eCLIP17.2■□□□□ 0.34
PHRF1-204ENST00000532550 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
PHRF1-204ENST00000532550 PRLP01236 227 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 TEAD1P28347 426 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 NR2C2P49116 596 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 DPTQ07507 201 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 ZBTB17Q13105 803 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 PERM1Q5SV97 790 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 NLRP8Q86W28 1048 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 CNTD1Q8N815 330 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 LPCAT1Q8NF37 534 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 OR6C4Q8NGE1 309 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 SMIM14Q96QK8 99 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 ADGRE3Q9BY15 652 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 TMEM168Q9H0V1 697 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 ABCG8Q9H221 673 aa17.2■□□□□ 0.34
PHRF1-204ENST00000532550 CARS2Q9HA77 564 aaKnown RBP17.2■□□□□ 0.34
PHRF1-204ENST00000532550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
PHRF1-204ENST00000532550 LRP4O75096 1905 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 A0A0A6YYK5 440 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-204ENST00000532550 PRSS38A1L453 326 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 ANKRD66B4E2M5 251 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CST8O60676 142 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CLDN7O95471 211 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CEACAM5P06731 702 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 PYGLP06737 847 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 MMP2P08253 660 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CDKN2BP42772 138 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 SKOR1P84550 965 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CDK3Q00526 305 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 KAZNQ674X7 775 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 RAVER1Q8IY67 606 aaKnown RBP17.19■□□□□ 0.34
PHRF1-204ENST00000532550 RCOR2Q8IZ40 523 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 NRSN1Q8IZ57 195 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 AGAP3Q96P47 875 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 OLFM3Q96PB7 478 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CCDC3Q9BQI4 270 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CEP41Q9BYV8 373 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 DPEP2Q9H4A9 486 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 TFR2Q9UP52 801 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 PCDHB1Q9Y5F3 818 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 ARHGEF17Q96PE2 2063 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CHD6Q8TD26 2715 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CFAP47Q6ZTR5 3102 aa17.19■□□□□ 0.34
PHRF1-204ENST00000532550 CAPN8A6NHC0 703 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 USP12O75317 370 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 NDUFA10O95299 355 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 STC1P52823 247 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 NAP1L1P55209 391 aaKnown RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 LLGL1Q15334 1064 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 ISXQ2M1V0 245 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 TFDP3Q5H9I0 405 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 OGFOD3Q6PK18 319 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 C19orf48Q6RUI8 117 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 SPOCD1Q6ZMY3 1216 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 RBM44Q6ZP01 1051 aaKnown RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 RFLNAQ6ZTI6 216 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 ZNF765Q7L2R6 523 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 DAAM2Q86T65 1068 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 CCDC50Q8IVM0 306 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 KATNAL2Q8IYT4 538 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 KYQ8NBH2 561 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 CCHCR1Q8TD31 782 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 HNRNPLLQ8WVV9 542 aaKnown RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 SCAMP4Q969E2 229 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 GRAMD1AQ96CP6 724 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 CALR3Q96L12 384 aaKnown RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 LYSMD1Q96S90 227 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 SLC25A51Q9H1U9 297 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 GOLPH3Q9H4A6 298 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 SUDS3Q9H7L9 328 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-204ENST00000532550 GPSM3Q9Y4H4 160 aa17.18■□□□□ 0.34
PHRF1-204ENST00000532550 UNC13CQ8NB66 2214 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 DSPP15924 2871 aaKnown RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 C1orf232A0A0U1RR37 186 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 LAMA5O15230 3695 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 BRINP1O60477 761 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 TCEA3O75764 348 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 ACTN2P35609 894 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms