RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CDKN3Q16667 212 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 PRAMEF14Q5SWL7 426 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 PAPD7Q5XG87 772 aaKnown RBP20.77■□□□□ 0.92
CCS-207ENST00000531990 PNCKQ6P2M8 343 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 ZNF765Q7L2R6 523 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 ATL2Q8NHH9 583 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 MAGOHBQ96A72 148 aaKnown RBP20.77■□□□□ 0.92
CCS-207ENST00000531990 AP2M1Q96CW1 435 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 TRIM44Q96DX7 344 aaPredicted RBP20.77■□□□□ 0.92
CCS-207ENST00000531990 TBL1YQ9BQ87 522 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 RTKNQ9BST9 563 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 APOOQ9BUR5 198 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 AP1M1Q9BXS5 423 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 LRRC40Q9H9A6 602 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 RAD18Q9NS91 495 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 CD84Q9UIB8 345 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 SAR1BQ9Y6B6 198 aa20.77■□□□□ 0.92
CCS-207ENST00000531990 SPTY2D1-AS1A0A0U1RR47 76 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 E7EVH7 732 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 CACNB4O00305 520 aaPredicted RBP20.76■□□□□ 0.91
CCS-207ENST00000531990 ZNF185O15231 689 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 SLC4A1P02730 911 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 ADRA1AP35348 466 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 KCNJ1P48048 391 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 LMAN1P49257 510 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 DPTQ07507 201 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 FAXCQ5TGI0 409 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 RAET1GQ6H3X3 334 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 C4orf22Q6V702 233 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 RANBP10Q6VN20 620 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 PARGQ86W56 976 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 KLHDC8BQ8IXV7 354 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 TAB3Q8N5C8 712 aaPredicted RBP20.76■□□□□ 0.91
CCS-207ENST00000531990 PLA2G15Q8NCC3 412 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 BLOC1S5Q8TDH9 187 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 ABCG8Q9H221 673 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 WDR26Q9H7D7 661 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 DNAJC28Q9NX36 388 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 FEZ2Q9UHY8 353 aaPredicted RBP20.76■□□□□ 0.91
CCS-207ENST00000531990 OR1A2Q9Y585 309 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 PCDHGB2Q9Y5G2 931 aa20.76■□□□□ 0.91
CCS-207ENST00000531990 ERI2A8K979 691 aaKnown RBP20.75■□□□□ 0.91
CCS-207ENST00000531990 PDE2AO00408 941 aaPredicted RBP20.75■□□□□ 0.91
CCS-207ENST00000531990 ETS1P14921 441 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 KELP23276 732 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 GPR1P46091 355 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 RXRGP48443 463 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 SPINT3P49223 89 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 FZD2Q14332 565 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 NFATC4Q14934 902 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 KDM7AQ6ZMT4 941 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 MACC1Q6ZN28 852 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 TMC3Q7Z5M5 1100 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 LINC00523Q86TU6 105 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 NLRP8Q86W28 1048 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 APOL2Q9BQE5 337 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 CDH19Q9H159 772 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 RAB6BQ9NRW1 208 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 PHPT1Q9NRX4 125 aaPredicted RBP20.75■□□□□ 0.91
CCS-207ENST00000531990 SMARCAL1Q9NZC9 954 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 SPO11Q9Y5K1 396 aa20.75■□□□□ 0.91
CCS-207ENST00000531990 ASCC3Q8N3C0 2202 aaKnown RBP20.75■□□□□ 0.91
CCS-207ENST00000531990 H3BM21 787 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 PCDHGA12O60330 932 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 USP12O75317 370 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 AP2A1O95782 977 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 HOXC4P09017 264 aaPredicted RBP20.74■□□□□ 0.91
CCS-207ENST00000531990 TEAD1P28347 426 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 CASQ1P31415 396 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 TRIM23P36406 574 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 ETF1P62495 437 aaKnown RBP20.74■□□□□ 0.91
CCS-207ENST00000531990 IL9RQ01113 521 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 SPARCL1Q14515 664 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 PUM1Q14671 1186 aaKnown RBP eCLIP20.74■□□□□ 0.91
CCS-207ENST00000531990 CYP1B1Q16678 543 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 INAVAQ3KP66 663 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 HS1BP3Q53T59 392 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 KCTD11Q693B1 232 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 RFLNAQ6ZTI6 216 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 GLT6D1Q7Z4J2 308 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 PDCD7Q8N8D1 485 aaKnown RBP20.74■□□□□ 0.91
CCS-207ENST00000531990 CAPZA3Q96KX2 299 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 WDR92Q96MX6 357 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 FAM83DQ9H4H8 585 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 ETNK1Q9HBU6 452 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 CABIN1Q9Y6J0 2220 aa20.74■□□□□ 0.91
CCS-207ENST00000531990 TDRD6O60522 2096 aaKnown RBP20.73■□□□□ 0.91
CCS-207ENST00000531990 K7ESM1 405 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 FLRT2O43155 660 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 PHF2O75151 1096 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 EPHA8P29322 1005 aaPredicted RBP20.73■□□□□ 0.91
CCS-207ENST00000531990 RPL22P35268 128 aaKnown RBP20.73■□□□□ 0.91
CCS-207ENST00000531990 HMGCLP35914 325 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 COILP38432 576 aaPredicted RBP20.73■□□□□ 0.91
CCS-207ENST00000531990 KIAA1024LP59773 190 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 HNRNPKP61978 463 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCS-207ENST00000531990 OLIG2Q13516 323 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 TPRG1LQ5T0D9 272 aa20.73■□□□□ 0.91
CCS-207ENST00000531990 CCDC137Q6PK04 289 aaKnown RBP20.73■□□□□ 0.91
CCS-207ENST00000531990 ENPP7Q6UWV6 458 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms