RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C17orf82Q86X59 251 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 DTX1Q86Y01 620 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 PMEPA1Q969W9 287 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 DTD2Q96FN9 168 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 ZNF599Q96NL3 588 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 GSDMCQ9BYG8 508 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 FRMD8Q9BZ67 464 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 NOD2Q9HC29 1040 aa18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 CNOT8Q9UFF9 292 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-206ENST00000531405 A0A1W2PQC6 194 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 NPIPB15A6NHN6 443 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 SOCS5O75159 536 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 FTLP02792 175 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 ITGB2P05107 769 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 TCF4P15884 667 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 CR2P20023 1033 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 AMPD1P23109 780 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 HCAR3P49019 387 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 CDK3Q00526 305 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 TBR1Q16650 682 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 SMTNL2Q2TAL5 461 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 E4F1Q66K89 784 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 RAET1GQ6H3X3 334 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 PPP1R2P3Q6NXS1 205 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 DOK6Q6PKX4 331 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 Q6ZVL8 140 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 ZNF571Q7Z3V5 609 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 TSPAN33Q86UF1 283 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 AOPEPQ8N6M6 819 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 HTR3CQ8WXA8 447 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 SPOCK2Q92563 424 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 CCDC74BQ96LY2 380 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 NUDCD1Q96RS6 583 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 HAUS4Q9H6D7 363 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 PLEKHM1Q9Y4G2 1056 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 PCDHB11Q9Y5F2 797 aa18.4■□□□□ 0.54
SSSCA1-206ENST00000531405 IGHV5-10-1A0A0J9YXX1 117 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 ITGB6P18564 788 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 IL1R2P27930 398 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 CD1CP29017 333 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 ARSDP51689 593 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 CTBSQ01459 385 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 NR1D2Q14995 579 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 ASIC2Q16515 512 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 NKAIN2Q5VXU1 208 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 RFLNAQ6ZTI6 216 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 PSTKQ8IV42 348 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 NAGSQ8N159 534 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 CBARPQ8N350 705 aaPredicted RBP18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 LZTR1Q8N653 840 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 FNIP1Q8TF40 1166 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 ZNF653Q96CK0 615 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 SMIM14Q96QK8 99 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 ZWILCHQ9H900 591 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 STARD5Q9NSY2 213 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 TRNAU1APQ9NX07 287 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 MYO1AQ9UBC5 1043 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 PHTF1Q9UMS5 762 aa18.39■□□□□ 0.53
SSSCA1-206ENST00000531405 H3BRJ5 948 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 MAFKO60675 156 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 FGF3P11487 239 aaPredicted RBP18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 CTPS1P17812 591 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 MPSTP25325 297 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 ADCY8P40145 1251 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 BIRC2Q13490 618 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 TMEM164Q5U3C3 297 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 TMCO3Q6UWJ1 677 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 ZSCAN1Q8NBB4 408 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 HSPH1Q92598 858 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 MGME1Q9BQP7 344 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 AKAP7Q9P0M2 348 aaPredicted RBP18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 CD84Q9UIB8 345 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 MYO6Q9UM54 1294 aa18.38■□□□□ 0.53
SSSCA1-206ENST00000531405 A0A1W2PQ67 120 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 PPM1DO15297 605 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 CYP2A6P11509 494 aaPredicted RBP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 CD82P27701 267 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 CSF2RBP32927 897 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 ARL4AP40617 200 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 ZNF135P52742 658 aaPredicted RBP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 DPYSL2Q16555 572 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 TXNRD3NBQ6F5E7 133 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 POLNQ7Z5Q5 900 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 TRIM74Q86UV6 250 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 ATPAF2Q8N5M1 289 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 CSPG4P5Q96PW8 444 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 TMEM9Q9P0T7 183 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 SLC17A4Q9Y2C5 497 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 TMEM98Q9Y2Y6 226 aa18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 ZNF106Q9H2Y7 1883 aaKnown RBP18.37■□□□□ 0.53
SSSCA1-206ENST00000531405 STMND1H3BQB6 276 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 HGSO14964 777 aaPredicted RBP18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 PGLSO95336 258 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 SOD1P00441 154 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 IVLP07476 585 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms