RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 IL1RAPL2Q9NP60 686 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 WASH6PQ9NQA3 447 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 FAM114A2Q9NRY5 505 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 ZNF212Q9UDV6 495 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 DNAJB4Q9UDY4 337 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 NUP50Q9UKX7 468 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 PCDHA12Q9UN75 941 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 ERVK-11Q9UQG0 969 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 FAM50BQ9Y247 325 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 B3GNT3Q9Y2A9 372 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 COX11Q9Y6N1 276 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 UHRF1BP1Q6BDS2 1440 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 FRMPD4Q14CM0 1322 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 ITIH6Q6UXX5 1313 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 MBD5Q9P267 1494 aa5.7□□□□□ -1.5
CD44-231ENST00000531110 OVOS2A0A0G2JMS6 1433 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 OVOS2A0A0J9YW53 1432 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 RGS12O14924 1447 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 OVOS2Q6IE36 1432 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 A0A1B0GWJ7 208 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CTAGE15A4D2H0 777 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SLC9B1P1A6NJY1 282 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 GOLGA8JA6NMD2 632 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SLCO1B7G3V0H7 640 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 AGPSO00116 658 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SLC9A3R1O14745 358 aaPredicted RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 POLR1CO15160 346 aaPredicted RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 HOXC11O43248 304 aaPredicted RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 TRAPPC3O43617 180 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CCNT1O60563 726 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 CLN5O75503 358 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CRTAPO75718 401 aaPredicted RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 RSL1D1O76021 490 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 USP1O94782 785 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PDHA1P08559 390 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SNRPAP09012 282 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 ELFN1P0C7U0 828 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CTAGE8P0CG41 777 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 NQO1P15559 274 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 STMN1P16949 149 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TPH1P17752 444 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 DRD4P21917 467 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 BMP5P22003 454 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SOX6P35712 828 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 LIPAP38571 399 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PLA2G5P39877 138 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PRIM2P49643 509 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 BCAP31P51572 246 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 STAT2P52630 851 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 AK2P54819 239 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 GNG2P59768 71 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 NHLH1Q02575 133 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 FCHO2Q0JRZ9 810 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 COASYQ13057 564 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ASIC2Q16515 512 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 FAM153CQ494X1 144 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 FAM76BQ5HYJ3 339 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CLVS2Q5SYC1 327 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TPGS2Q68CL5 300 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ATL3Q6DD88 541 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PLAG1Q6DJT9 500 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 RFPL4BQ6ZWI9 263 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 MARK2Q7KZI7 788 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 RNF44Q7L0R7 432 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PARS2Q7L3T8 475 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 KCTD20Q7Z5Y7 419 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CTAGE6Q86UF2 777 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 KRT73Q86Y46 540 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 P3H2Q8IVL5 708 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CTAGE4Q8IX94 777 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 DIS3L2Q8IYB7 885 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 VGLL2Q8N8G2 317 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 PPFIBP2Q8ND30 876 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ZNF680Q8NEM1 530 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TTLQ8NG68 377 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 LHFPL5Q8TAF8 219 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TEX47Q8TBZ9 253 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SLC26A7Q8TE54 656 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ZNF384Q8TF68 577 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 NAT14Q8WUY8 206 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 NCLNQ969V3 563 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 RMND5BQ96G75 393 aaPredicted RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 FAM20AQ96MK3 541 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ZNF560Q96MR9 790 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 AP1M1Q9BXS5 423 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CNOT10Q9H9A5 744 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 FANCEQ9HB96 536 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 SYTL2Q9HCH5 934 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TBC1D22BQ9NU19 505 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ABCF3Q9NUQ8 709 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ARHGEF38Q9NXL2 777 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 MRPL39Q9NYK5 338 aaKnown RBP5.69□□□□□ -1.5
CD44-231ENST00000531110 STMN3Q9NZ72 180 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 DLGAP2Q9P1A6 1054 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TBC1D14Q9P2M4 693 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 C11orf21Q9P2W6 132 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CORO2BQ9UQ03 480 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CBY1Q9Y3M2 126 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 HEY1Q9Y5J3 304 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms