RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PRRT3Q5FWE3 981 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 KDELC1Q6UW63 502 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 LYSMD3Q7Z3D4 306 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 HEATR4Q86WZ0 1026 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 IFT43Q96FT9 208 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 MLPHQ9BV36 600 aaPredicted RBP18.7■□□□□ 0.58
GMDS-208ENST00000530927 SCNM1Q9BWG6 230 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 CLPBQ9H078 707 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 SUDS3Q9H7L9 328 aaPredicted RBP18.7■□□□□ 0.58
GMDS-208ENST00000530927 SHOC2Q9UQ13 582 aa18.7■□□□□ 0.58
GMDS-208ENST00000530927 AQP9O43315 295 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 TJP3O95049 919 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 CA4P22748 312 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 TRIM23P36406 574 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 CHRNA4P43681 627 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 CDK18Q07002 472 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 KLF1Q13351 362 aaPredicted RBP18.69■□□□□ 0.58
GMDS-208ENST00000530927 XRCC4Q13426 336 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 OLIG2Q13516 323 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 PROX2Q3B8N5 592 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 HS1BP3Q53T59 392 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 DARS2Q6PI48 645 aaKnown RBP18.69■□□□□ 0.58
GMDS-208ENST00000530927 RAB44Q7Z6P3 723 aaPredicted RBP18.69■□□□□ 0.58
GMDS-208ENST00000530927 TRIM74Q86UV6 250 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 NDUFAF2Q8N183 169 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 OR4C6Q8NH72 309 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 WDR24Q96S15 920 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 WDR26Q9H7D7 661 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 KLQ9UEF7 1012 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 PPP2R2CQ9Y2T4 447 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 SPO11Q9Y5K1 396 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 BPTFQ12830 3046 aa18.69■□□□□ 0.58
GMDS-208ENST00000530927 LY6G6EA0A0G2JKS1 128 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 PSMD11O00231 422 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 AURKAO14965 403 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 KCNN4O15554 427 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 TSHRP16473 764 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 WNT3AP56704 352 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 SRP54P61011 504 aaKnown RBP18.68■□□□□ 0.58
GMDS-208ENST00000530927 RPL26P61254 145 aaKnown RBP18.68■□□□□ 0.58
GMDS-208ENST00000530927 PPARDQ03181 441 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 RAET1GQ6H3X3 334 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 DHRS13Q6UX07 377 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 SLC25A41Q8N5S1 370 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 ATG4AQ8WYN0 398 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
GMDS-208ENST00000530927 MRGPRX2Q96LB1 330 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 WDR92Q96MX6 357 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 LYSMD1Q96S90 227 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 ADGRE3Q9BY15 652 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 USP29Q9HBJ7 922 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 RSPH14Q9UHP6 348 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 ANGPTL2Q9UKU9 493 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 RPL26L1Q9UNX3 145 aaKnown RBP18.68■□□□□ 0.58
GMDS-208ENST00000530927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
GMDS-208ENST00000530927 U3KQA8 63 aa18.68■□□□□ 0.58
GMDS-208ENST00000530927 H3BM21 787 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 CACNB4O00305 520 aaPredicted RBP18.67■□□□□ 0.58
GMDS-208ENST00000530927 TOR1BO14657 336 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 DKK1O94907 266 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 FUCA1P04066 466 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 NFKBIAP25963 317 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 POLD2P49005 469 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 ACADVLP49748 655 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 HK3P52790 923 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 KIAA1024LP59773 190 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 CDK3Q00526 305 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 MEI1Q5TIA1 1274 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 CDKL3Q8IVW4 592 aaPredicted RBP18.67■□□□□ 0.58
GMDS-208ENST00000530927 IPMKQ8NFU5 416 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 ADAMTS14Q8WXS8 1223 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 AP2M1Q96CW1 435 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 FCRL5Q96RD9 977 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
GMDS-208ENST00000530927 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 FAM153AQ9UHL3 310 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 MOSPD1Q9UJG1 213 aa18.67■□□□□ 0.58
GMDS-208ENST00000530927 APOBEC2Q9Y235 224 aaKnown RBP18.67■□□□□ 0.58
GMDS-208ENST00000530927 CASC3O15234 703 aaKnown RBP18.66■□□□□ 0.58
GMDS-208ENST00000530927 MTSS1O43312 755 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 NDST3O95803 873 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 ZNF30P17039 623 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 PSMB4P28070 264 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 HTR1BP28222 390 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 CETN2P41208 172 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 GDF10P55107 478 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 SIRPB2Q5JXA9 342 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 ANKRD20A2Q5SQ80 823 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 ANKRD20A1Q5TYW2 823 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 ANKRD20A3Q5VUR7 823 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 DOK6Q6PKX4 331 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 ZNF662Q6ZS27 426 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 SFTPA2Q8IWL1 248 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 OR56A4Q8NGH8 313 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 CCL4L1Q8NHW4 92 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 APOLD1Q96LR9 279 aa18.66■□□□□ 0.58
GMDS-208ENST00000530927 TEX101Q9BY14 249 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms