RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 AFTPHQ6ULP2 937 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 HMGCLL1Q8TB92 370 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 SPAG4Q9NPE6 437 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 TAS2R13Q9NYV9 303 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 RIMS3Q9UJD0 308 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 A0A0D9SEW6 157 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 PRSS51A0A1B0GVH4 220 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 CCDC189A1A4V9 331 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 BBIP1A8MTZ0 92 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 INSIG1O15503 277 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 GJB3O75712 270 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 SLC4A1P02730 911 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 SLC6A4P31645 630 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 TUFMP49411 452 aaKnown RBP17.19■□□□□ 0.34
BRCA2-204ENST00000530893 OXCT1P55809 520 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ATP6V0D1P61421 351 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 BFSP2Q13515 415 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 GRM2Q14416 872 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 SEMA3AQ14563 771 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 TAF1AQ15573 450 aaPredicted RBP17.19■□□□□ 0.34
BRCA2-204ENST00000530893 UGT3A2Q3SY77 523 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 AGKQ53H12 422 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 REP15Q6BDI9 236 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ST13P4Q8IZP2 240 aaPredicted RBP17.19■□□□□ 0.34
BRCA2-204ENST00000530893 CFAP52Q8N1V2 620 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 PTGR2Q8N8N7 351 aaPredicted RBP17.19■□□□□ 0.34
BRCA2-204ENST00000530893 PNPLA1Q8N8W4 532 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 STAG3L4Q8TBR4 150 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 PXYLP1Q8TE99 480 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 GIPC2Q8TF65 315 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 PLD4Q96BZ4 506 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 TUBGCP5Q96RT8 1024 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ATOH8Q96SQ7 321 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 YIPF3Q9GZM5 350 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 DERL2Q9GZP9 239 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ADA2Q9NZK5 511 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 CCDC167Q9P0B6 97 aa17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ZFP37Q9Y6Q3 630 aaPredicted RBP17.19■□□□□ 0.34
BRCA2-204ENST00000530893 ILVBLA1L0T0 632 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 C2orf81A6NN90 581 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 DENRO43583 198 aaKnown RBP17.18■□□□□ 0.34
BRCA2-204ENST00000530893 AP1G1O43747 822 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 KERAO60938 352 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 GALTP07902 379 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CR2P20023 1033 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 PPP1R3AQ16821 1122 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CYHR1Q6ZMK1 362 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 RPS27LQ71UM5 84 aaKnown RBP17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CHST9Q7L1S5 443 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 KIAA1191Q96A73 305 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 ROPN1LQ96C74 230 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 NACA2Q9H009 215 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CCDC68Q9H2F9 335 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 RAB26Q9ULW5 256 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 H3BNC9 293 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 STX16-NPEPL1H3BU86 382 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 TRIM24O15164 1050 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 PFDN6O15212 129 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 NRP2O60462 931 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 NBNO60934 754 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 MTHFD2P13995 350 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CD9P21926 228 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 HSPA13P48723 471 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CLEC6AQ6EIG7 209 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 SLC8B1Q6J4K2 584 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 SEPT8Q92599 483 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 DCUN1D1Q96GG9 259 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CWH43Q9H720 699 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 CNOT11Q9UKZ1 510 aaKnown RBP17.18■□□□□ 0.34
BRCA2-204ENST00000530893 PHF24Q9UPV7 400 aa17.18■□□□□ 0.34
BRCA2-204ENST00000530893 SYCE1LA8MT33 242 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 FBP2O00757 339 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 AZIN1O14977 448 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 CDK14O94921 469 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 ZCCHC18P0CG32 403 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 SH3BP2P78314 561 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 FOLH1Q04609 750 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 PTPRCAPQ14761 206 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 RNF220Q5VTB9 566 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 LHX8Q68G74 356 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 GLT6D1Q7Z4J2 308 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 TICAM1Q8IUC6 712 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 MARVELD2Q8N4S9 558 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 RNF148Q8N7C7 305 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 PCYOX1LQ8NBM8 494 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 OR7D4Q8NG98 312 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 SH3RF2Q8TEC5 729 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 LPGAT1Q92604 370 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 TSC22D3Q99576 134 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 TDRD1Q9BXT4 1180 aaKnown RBP17.17■□□□□ 0.34
BRCA2-204ENST00000530893 DNAJC15Q9Y5T4 150 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 GBF1Q92538 1859 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms