RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ASNSD1Q9NWL6 643 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 MKLN1Q9UL63 735 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 AP4E1Q9UPM8 1137 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 TLR6Q9Y2C9 796 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 ANKRD6Q9Y2G4 727 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHGB3Q9Y5G1 929 aa8.14□□□□□ -1.11
CSDE1-214ENST00000530886 INMTO95050 263 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 EPN2O95208 641 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 VNN1O95497 513 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SLC4A1P02730 911 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GMPRP36959 345 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GBE1Q04446 702 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SPP2Q13103 211 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MFSD13AQ14CX5 517 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 HADHQ16836 314 aaKnown RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GRTP1Q5TC63 336 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TTC23Q5W5X9 447 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TMEM198Q66K66 360 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 DNAJC24Q6P3W2 148 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PAGE2Q7Z2X7 111 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 C2orf69Q8N8R5 385 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 NCLNQ969V3 563 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MCEEQ96PE7 176 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF577Q9BSK1 485 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC32Q9BV29 185 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 FAM49AQ9H0Q0 323 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ING2Q9H160 280 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 STAP1Q9ULZ2 295 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TRAPPC4Q9Y296 219 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHA1Q9Y5I3 950 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PTPRJQ12913 1337 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ATP6V1G2-DDX39BF2Z307 99 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PDHXO00330 501 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SDHDO14521 159 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 NEMP1O14524 444 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 CNTN5O94779 1100 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ATG7O95352 703 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SNRPB2P08579 225 aaKnown RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 IL1R1P14778 569 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF30P17039 623 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GGT5P36269 586 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 DYNLT1P63172 113 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GSTO1P78417 241 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 S100A12P80511 92 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 IKQ13123 557 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PIK3R6Q5UE93 754 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TMEM236Q5W0B7 351 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 DGLUCYQ7Z3D6 616 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PIGZQ86VD9 579 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 RETREG3Q86VR2 466 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PJA1Q8NG27 643 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MCFD2Q8NI22 146 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ADAM32Q8TC27 787 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 NODALQ96S42 347 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 LPIN3Q9BQK8 851 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SERHL2Q9H4I8 314 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 EPS8L2Q9H6S3 715 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 APOBEC3GQ9HC16 384 aaKnown RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SLC9A2Q9UBY0 812 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 STOML2Q9UJZ1 356 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 CPSF3Q9UKF6 684 aaKnown RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MTF2Q9Y483 593 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PIK3R2O00459 728 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 UGT2B17O75795 530 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 PRKD3O94806 890 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 CYP3A5P20815 502 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GNA15P30679 374 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 UGT2B15P54855 530 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 RPS8P62241 208 aaKnown RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 FOXM1Q08050 763 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 LAIR2Q6ISS4 152 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 VPS37AQ8NEZ2 397 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-214ENST00000530886 GLMNQ92990 594 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.13□□□□□ -1.114e-6■■□□□ 14.1
CSDE1-214ENST00000530886 CPNE1Q99829 537 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 WASH6PQ9NQA3 447 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 SRRDQ9UH36 339 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ZDHHC2Q9UIJ5 367 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 BTAF1O14981 1849 aa8.13□□□□□ -1.11
CSDE1-214ENST00000530886 ARPC4-TTLL3A0A0A6YYG9 625 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 FAM149AA5PLN7 773 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MRASO14807 208 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 NRP2O60462 931 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LRCH4O75427 683 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 GH2P01242 217 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PDGFAP04085 211 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ALPLP05186 524 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CHRNGP07510 517 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms