RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 HOOK3Q86VS8 718 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PLD5Q8N7P1 536 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SMYD1Q8NB12 490 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 OR2AP1Q8NGE2 309 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM81AQ8TBF8 368 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PIP4K2CQ8TBX8 421 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ATP6V1E2Q96A05 226 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM131CQ96AQ9 280 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CLIP3Q96DZ5 547 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TOE1Q96GM8 510 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 LRIG1Q96JA1 1093 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 EXOC2Q96KP1 924 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF599Q96NL3 588 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TSGA13Q96PP4 275 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 HEPHQ9BQS7 1158 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 AP1M1Q9BXS5 423 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM8Q9BZR9 551 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 BRD8Q9H0E9 1235 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MIR1-1HGQ9H1L0 117 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 EPN3Q9H201 632 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 NEUROG2Q9H2A3 272 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PABPC3Q9H361 631 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 FBXL12Q9NXK8 326 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 DTLQ9NZJ0 730 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 HECAQ9UBI9 543 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 UBA2Q9UBT2 640 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 IL36AQ9UHA7 158 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 NCKAP1Q9Y2A7 1128 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PPP2R2CQ9Y2T4 447 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 HRH3Q9Y5N1 445 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 WASF2Q9Y6W5 498 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MUC22E2RYF6 1773 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM221AA4D161 298 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MIF4GDA9UHW6 222 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 C1QTNF3-AMACRE9PGA6 284 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 APOL1O14791 398 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MATN3O15232 486 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MFSD11O43934 449 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 KLHL41O60662 606 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CST8O60676 142 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF254O75437 659 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LEFTY1O75610 366 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CPP00450 1065 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PYGMP11217 842 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 KRT10P13645 584 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 EDN3P14138 238 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MX2P20592 715 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CES1P23141 567 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ACSL1P33121 698 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 DRD3P35462 400 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 GARSP41250 739 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PSMD8P48556 350 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CSNK1DP48730 415 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 NR2C2P49116 596 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PSMD7P51665 324 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 METAP1P53582 386 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 COPS2P61201 443 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RHOAP61586 193 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TMPRSS15P98073 1019 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 GBE1Q04446 702 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LAMB3Q13751 1172 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CKAP5Q14008 2032 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 HNRNPDQ14103 355 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TFDP2Q14188 446 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LBRQ14739 615 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ELF2Q15723 593 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LPAL2Q16609 132 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MARC1Q5VT66 337 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PMS2CLQ68D20 193 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LAIR1Q6GTX8 287 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 SYT10Q6XYQ8 523 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 BZW1Q7L1Q6 419 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LPCAT2Q7L5N7 544 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PEX26Q7Z412 305 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CACUL1Q86Y37 369 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RFX6Q8HWS3 928 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LURAP1LQ8IV03 231 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TMEFF1Q8IYR6 380 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 HDDC3Q8N4P3 179 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 AADATQ8N5Z0 425 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TEX26Q8N6G2 289 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CADM4Q8NFZ8 388 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 NUP205Q92621 2012 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ALG3Q92685 438 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms