RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ZNF549Q6P9A3 640 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 LINGO4Q6UY18 593 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 MAVSQ7Z434 540 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ISCA2Q86U28 154 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TTC30BQ8N4P2 665 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 KIAA1958Q8N8K9 716 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 FAM13CQ8NE31 585 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 HERVK_113Q902F9 699 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 L3HYPDHQ96EM0 354 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 EXOC2Q96KP1 924 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TUBGCP5Q96RT8 1024 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CORO1BQ9BR76 489 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC46A2Q9BY10 475 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CADM1Q9BY67 442 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 POMKQ9H5K3 350 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TCF7L2Q9NQB0 619 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ARMCX1Q9P291 453 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TBC1D14Q9P2M4 693 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CRYL1Q9Y2S2 319 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 A0A1W2PRU2 124 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 LCHNA4D1U4 455 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PRR5-ARHGAP8B1AHC4 643 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 HTRA2O43464 458 aaPredicted RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 VPS26AO75436 327 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SRP72O76094 671 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 RB1P06400 928 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 POU2F2P09086 479 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PIRTP0C851 137 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CD1DP15813 335 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TCF3P15923 654 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 HMGCLP35914 325 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 RAP1GDS1P52306 607 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SNRPD1P62314 119 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ARHGAP8P85298 464 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CACNG1Q06432 222 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SULT2A1Q06520 285 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 RAD51Q06609 339 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 USP4Q13107 963 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PLEKHG6Q3KR16 790 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PDE12Q6L8Q7 609 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ELMSAN1Q6PJG2 1045 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ATG14Q6ZNE5 492 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TREML1Q86YW5 311 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 RNF135Q8IUD6 432 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 BBS7Q8IWZ6 715 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 LSMEM2Q8N112 164 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CPSF7Q8N684 471 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CCNYL1Q8N7R7 359 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 TXNDC5Q8NBS9 432 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 STAG3L4Q8TBR4 150 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 LPGAT1Q92604 370 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 OTUB2Q96DC9 234 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 MYO19Q96H55 970 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 NSMCE3Q96MG7 304 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CEP44Q9C0F1 390 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 DERL2Q9GZP9 239 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ATP13A3Q9H7F0 1226 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 IL17CQ9P0M4 197 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CDYLQ9Y232 598 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC4A7Q9Y6M7 1214 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 HELZP42694 1942 aaKnown RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 SYCE1LA8MT33 242 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 A8MT66 165 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 CCL22O00626 93 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 GRM6O15303 877 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 BUD23O43709 281 aaKnown RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 XYLBO75191 536 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 RHOBTB1O94844 696 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ESR1P03372 595 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PKMP14618 531 aaKnown RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF37AP17032 561 aaPredicted RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 NCF2P19878 526 aaPredicted RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 MC4RP32245 332 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PGM1P36871 562 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ABL2P42684 1182 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 LMAN2Q12907 356 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 SEMA3AQ14563 771 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 TMEM240Q5SV17 173 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 GPR158Q5T848 1215 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 C6orf163Q5TEZ5 329 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 RINLQ6ZS11 566 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 LDB1Q86U70 411 aaPredicted RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 HOMEZQ8IX15 550 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 CMTM8Q8IZV2 173 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 APCDD1Q8J025 514 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 CBARPQ8N350 705 aaPredicted RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 KDM1BQ8NB78 822 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ANKRD49Q8WVL7 239 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PIH1D2Q8WWB5 315 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 KIAA1191Q96A73 305 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PRR11Q96HE9 360 aaPredicted RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 GPR63Q9BZJ6 419 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 TLR9Q9NR96 1032 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ZDHHC2Q9UIJ5 367 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 APPL1Q9UKG1 709 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 FCF1Q9Y324 198 aaKnown RBP14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PCDHB9Q9Y5E1 797 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 PCDHB1Q9Y5F3 818 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms