RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SH3KBP1Q96B97 665 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 SCRN2Q96FV2 425 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 POM121L2Q96KW2 1035 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 C8orf48Q96LL4 319 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 RMDN3Q96TC7 470 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 CLSTN3Q9BQT9 956 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.54□□□□□ -2
ECHDC1-219ENST00000526299 LMAN2LQ9H0V9 348 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 ESRP2Q9H6T0 727 aaKnown RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 ERVMER34-1Q9H9K5 563 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 MKKSQ9NPJ1 570 aaPredicted RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 NLRC4Q9NPP4 1024 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 DDX4Q9NQI0 724 aaKnown RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 BABAM1Q9NWV8 329 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 MRPS28Q9Y2Q9 187 aaKnown RBP2.54□□□□□ -2
ECHDC1-219ENST00000526299 LOXL2Q9Y4K0 774 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 KIAA1210Q9ULL0 1709 aa2.54□□□□□ -2
ECHDC1-219ENST00000526299 COL5A2P05997 1499 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 ZNHIT1O43257 154 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 SYNGR3O43761 229 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 PRKNO60260 465 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 MMP2P08253 660 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 CST5P28325 142 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 MAP2K2P36507 400 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 AMPHP49418 695 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 TNFAIP2Q03169 654 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 ITGA9Q13797 1035 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 SLC45A4Q5BKX6 768 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 FAM83BQ5T0W9 1011 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 TANGO2Q6ICL3 276 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 KCTD18Q6PI47 426 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 TMTC1Q8IUR5 882 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 ZCCHC9Q8N567 271 aaKnown RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 OR2AK2Q8NG84 335 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 FCAMRQ8WWV6 532 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 RAB40AQ8WXH6 277 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 PIGTQ969N2 578 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 TAAR8Q969N4 342 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 LINGO1Q96FE5 620 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 FGF22Q9HCT0 170 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 CCDC177Q9NQR7 707 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 SRP68Q9UHB9 627 aaKnown RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 RASAL2Q9UJF2 1139 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 TTC7AQ9ULT0 858 aaPredicted RBP2.53□□□□□ -2
ECHDC1-219ENST00000526299 SUFUQ9UMX1 484 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 CARD8Q9Y2G2 431 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 DLGAP4Q9Y2H0 992 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 DERAQ9Y315 318 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 STON1Q9Y6Q2 735 aa2.53□□□□□ -2
ECHDC1-219ENST00000526299 A0A087X002 238 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 CTAGE9A4FU28 777 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 PER2O15055 1255 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 CTAGE8P0CG41 777 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 HOXC8P31273 242 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 MRPS5P82675 430 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 RPL24P83731 157 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 ICA1Q05084 483 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 ZNF234Q14588 700 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 TMEM35AQ53FP2 167 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 SGO1Q5FBB7 561 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 OR7E24Q6IFN5 339 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 TTI2Q6NXR4 508 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 XRRA1Q6P2D8 792 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 C17orf99Q6UX52 265 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 RBMS3Q6XE24 437 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 FAM160B2Q86V87 743 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 CTAGE4Q8IX94 777 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 OR52I2Q8NH67 350 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 FBXL8Q96CD0 374 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 IWS1Q96ST2 819 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 NEURL2Q9BR09 285 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 CABLES2Q9BTV7 478 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 WDR12Q9GZL7 423 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 NDST4Q9H3R1 872 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 BICC1Q9H694 974 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 MAGEE1Q9HCI5 957 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 GPR108Q9NPR9 543 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 CACNG5Q9UF02 275 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 ACSL5Q9ULC5 683 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 ZHX2Q9Y6X8 837 aa2.52□□□□□ -2.01
ECHDC1-219ENST00000526299 ADAMTS9Q9P2N4 1935 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 BCAT2O15382 392 aaPredicted RBP2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 EDN2P20800 178 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 AGAP20933 346 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 METAP2P50579 478 aaKnown RBP eCLIP2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 RAD23BP54727 409 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 GRIK3Q13003 919 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 NAA25Q14CX7 972 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 VEPH1Q14D04 833 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 C2orf68Q2NKX9 166 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 TECRLQ5HYJ1 363 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 FAAP20Q6NZ36 180 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 FBXO46Q6PJ61 603 aaPredicted RBP2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 METTL7BQ6UX53 244 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 GPAT4Q86UL3 456 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 ANKRD13AQ8IZ07 590 aa2.51□□□□□ -2.01
ECHDC1-219ENST00000526299 SPATA6LQ8N4H0 392 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms