RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	SIK3	Q9Y2K2	1263 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	OAS3	Q9Y6K5	1087 aa	Known RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	FGF18	O76093	207 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	UGT1A1	P22309	533 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	IL12B	P29460	328 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	MRPS5	P82675	430 aa	Known RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	BNIP1	Q12981	228 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	BMPR2	Q13873	1038 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	SF1	Q15637	639 aa	Known RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	SMTNL2	Q2TAL5	461 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	C2orf27A	Q580R0	203 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	DHDDS	Q86SQ9	333 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	ZDHHC12	Q96GR4	267 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	PPP1R36	Q96LQ0	422 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	RETREG1	Q9H6L5	497 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	PNPLA8	Q9NP80	782 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	RSL24D1	Q9UHA3	163 aa	Known RBP	10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	KLF15	Q9UIH9	416 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	NENF	Q9UMX5	172 aa		10.34	□□□□□ -0.75
TCF7-223	ENST00000522653	AGPS	O00116	658 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	GPR37L1	O60883	481 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	STX11	O75558	287 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SOD2	P04179	222 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PCCB	P05166	539 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	FGFR3	P22607	806 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ACTR1B	P42025	376 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ST13	P50502	369 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	OC90	Q02509	493 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	TCEAL6	Q6IPX3	200 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	OR6C4	Q8NGE1	309 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF563	Q8TA94	476 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ACTRT2	Q8TDY3	377 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	POF1B	Q8WVV4	589 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF606	Q8WXB4	792 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ING5	Q8WYH8	240 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	KLHL5	Q96PQ7	755 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	LDAH	Q9H6V9	325 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	DIABLO	Q9NR28	239 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	HMGXB4	Q9UGU5	601 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	WDR37	Q9Y2I8	494 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PGM3	O95394	542 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PON1	P27169	355 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	UGT1A5	P35504	534 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	NR1D2	Q14995	579 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM187B	Q17R55	369 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ALLC	Q8N6M5	410 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	RAB7B	Q96AH8	199 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ZCWPW1	Q9H0M4	648 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	NOL6	Q9H6R4	1146 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ALKBH4	Q9NXW9	302 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	CALML5	Q9NZT1	146 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	NT5C1B-RDH14	C9J2C7	533 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ACOT7	O00154	380 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	KHNYN	O15037	678 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SEMA3D	O95025	777 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	ENDOU	P21128	410 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PER3	P56645	1201 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	VARS2	Q5ST30	1063 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	AAGAB	Q6PD74	315 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	FGD2	Q7Z6J4	655 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PSTK	Q8IV42	348 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PIGK	Q92643	395 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	FTSJ1	Q9UET6	329 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	CPQ	Q9Y646	472 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SESN1	Q9Y6P5	492 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PITPNM1	O00562	1244 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	DNALI1	O14645	258 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	CD3EAP	O15446	510 aa	Known RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	TIMP1	P01033	207 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	CAPN1	P07384	714 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	TACR2	P21452	398 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	MAGEA10	P43363	369 aa	Predicted RBP	10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SEC23A	Q15436	765 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	STRA8	Q7Z7C7	330 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	PARG	Q86W56	976 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	AP2M1	Q96CW1	435 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	CCM2	Q9BSQ5	444 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SEMA6B	Q9H3T3	888 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	FAM83D	Q9H4H8	585 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	SORCS3	Q9UPU3	1222 aa		10.33	□□□□□ -0.76
TCF7-223	ENST00000522653	MATN2	O00339	956 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	SCGB2A1	O75556	95 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	SERPINB7	O75635	380 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	LYN	P07948	512 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	GTF2B	Q00403	316 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	NFIL3	Q16649	462 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	ZNF618	Q5T7W0	954 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	FIP1L1	Q6UN15	594 aa	Known RBP	10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	SLC39A5	Q6ZMH5	540 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	AADAT	Q8N5Z0	425 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	SIDT2	Q8NBJ9	832 aa	Known RBP	10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	ZFAND2B	Q8WV99	257 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	BAP1	Q92560	729 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	BORCS5	Q969J3	196 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	EBF2	Q9HAK2	575 aa		10.32	□□□□□ -0.76
TCF7-223	ENST00000522653	KCNK4	Q9NYG8	393 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms