RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 AGBL4Q5VU57 503 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 FAM46CQ5VWP2 391 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 USP45Q70EL2 814 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 PALM2Q8IXS6 379 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 TLCD1Q96CP7 247 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 FCRL3Q96P31 734 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 PPP1R2P1Q96PQ5 205 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 MYOCQ99972 504 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CTNNAL1Q9UBT7 734 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 ZC3H7BQ9UGR2 993 aaKnown RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 MMP20O60882 483 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 C5AR1P21730 350 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 MAGEA3P43357 314 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 NEK3P51956 506 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 PTSQ03393 145 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 DMWDQ09019 674 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 MSLNQ13421 630 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 SPRED3Q2MJR0 410 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 PIP5KL1Q5T9C9 394 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CPLX4Q7Z7G2 160 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 KLHDC8BQ8IXV7 354 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 STAMBPL1Q96FJ0 436 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 LRIG1Q96JA1 1093 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 VPS37BQ9H9H4 285 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 SLC17A6Q9P2U8 582 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 ZNF711Q9Y462 761 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3DA0A087WVF3 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3IA0A087WXS9 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3EA0A087X179 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3KA0A087X1G2 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3FA6NER0 549 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3LB9A6J9 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 SPINT1O43278 529 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 LDB2O43679 373 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ATG13O75143 517 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3HP0C7X1 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 PRSS56P0CW18 603 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ALADP13716 330 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 DRD4P21917 467 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ETV3P41162 512 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TAS2R38P59533 333 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.434e-9■■■■■ 29.3
PABPC1-219ENST00000522387 ARHGEF7Q14155 803 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 GKAP1Q5VSY0 366 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3GQ6DHY5 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3CQ6IPX1 549 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TRMT10BQ6PF06 316 aaKnown RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 C3orf62Q6ZUJ4 267 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBC1D3Q8IZP1 549 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 BRSK1Q8TDC3 778 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ARNT2Q9HBZ2 717 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TEX264Q9Y6I9 313 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 CHUKO15111 745 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ALOX15BO15296 676 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 VAPBO95292 243 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ADH1BP00325 375 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ELFN1P0C7U0 828 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 CXCL12P48061 93 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ARSDP51689 593 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 SEL1L3Q68CR1 1132 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 ERAP2Q6P179 960 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 Q6ZVL8 140 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 SPEM1Q8N4L4 309 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 PPHLN1Q8NEY8 458 aaKnown RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 SCAMP4Q969E2 229 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBATAQ96M53 351 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 EBNA1BP2Q99848 306 aaKnown RBP12.37□□□□□ -0.43
PABPC1-219ENST00000522387 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
PABPC1-219ENST00000522387 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 NUDT17P0C025 328 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 ERVK-10P10266 1014 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 MLNP12872 115 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 AOC1P19801 751 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 NPY2RP49146 381 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 GPX6P59796 221 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 SLMAPQ14BN4 828 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 ACOX1Q15067 660 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 E2F5Q15329 346 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 PCID2Q5JVF3 399 aa12.36□□□□□ -0.43
PABPC1-219ENST00000522387 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms