RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SLC44A1Q8WWI5 657 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 MFSD1Q9H3U5 465 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 UGT1A7Q9HAW7 530 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 UGT1A10Q9HAW8 530 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 UGT1A8Q9HAW9 530 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 CD248Q9HCU0 757 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 BCCIPQ9P287 314 aaKnown RBP eCLIP21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 CTNNAL1Q9UBT7 734 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 TBK1Q9UHD2 729 aa21.36■■□□□ 1.01
R3HCC1-208ENST00000522012 NEMP1O14524 444 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 DNTTP04053 509 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 ZNF30P17039 623 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 PSMA3P25788 255 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 MMP12P39900 470 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 ELP6Q0PNE2 266 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 GPS2Q13227 327 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 NAB1Q13506 487 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 MARK2Q7KZI7 788 aaKnown RBP21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 SLC26A11Q86WA9 606 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 FLCNQ8NFG4 579 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 OMDQ99983 421 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 FAM167BQ9BTA0 163 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 TBC1D17Q9HA65 648 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 TXNDC16Q9P2K2 825 aa21.35■■□□□ 1.01
R3HCC1-208ENST00000522012 A0A1W2PP55 124 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 TCRBV21S2A2A0A5A6 115 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 CDH16O75309 829 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 RNASEH2AO75792 299 aaKnown RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 FAM155BO75949 473 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 C1SP09871 688 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 DRD3P35462 400 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 STC1P52823 247 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 RALGDSQ12967 914 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 CRY1Q16526 586 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 PIP5KL1Q5T9C9 394 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 AFTPHQ6ULP2 937 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 TDRPQ86YL5 185 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 OR4L1Q8NH43 312 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 GABPB2Q8TAK5 448 aaPredicted RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 CALML6Q8TD86 181 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 DCAKDQ8WVC6 231 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 RAB7BQ96AH8 199 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 SIPA1Q96FS4 1042 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 SH3GL2Q99962 352 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 DHRS4Q9BTZ2 278 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 WRAP53Q9BUR4 548 aaKnown RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 TMBIM4Q9HC24 238 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 PSMC3IPQ9P2W1 217 aaPredicted RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 AREL1O15033 823 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 RGS16O15492 202 aaPredicted RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 SPINT1O43278 529 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 BPIP17213 487 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 MC4RP32245 332 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 CCDC15Q0P6D6 951 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 FZD5Q13467 585 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 TMED2Q15363 201 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 HSP90B2PQ58FF3 399 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 ZNF470Q6ECI4 717 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 TRIM67Q6ZTA4 783 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 NECAB3Q96P71 396 aaPredicted RBP21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 FBXL12Q9NXK8 326 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 PKD2L2Q9NZM6 624 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 PSAT1Q9Y617 370 aa21.34■■□□□ 1.01
R3HCC1-208ENST00000522012 CHURC1-FNTBB4DL54 471 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 CD3EAPO15446 510 aaKnown RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 ATG13O75143 517 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 F7P08709 466 aaPredicted RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 ELFN1P0C7U0 828 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 LIG3P49916 1009 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 CTBP1Q13363 440 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 FASTKD1Q53R41 847 aaKnown RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 AGBL4Q5VU57 503 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 ADGRD1Q6QNK2 874 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 KIAA1324Q6UXG2 1013 aaKnown RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 PACS1Q6VY07 963 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 LIPIQ6XZB0 460 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 RFLNAQ6ZTI6 216 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 HSD11B1LQ7Z5J1 315 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 STRA8Q7Z7C7 330 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 DENND6AQ8IWF6 608 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 RIBC1Q8N443 379 aaPredicted RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 ARL8AQ96BM9 186 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 MRGPRX1Q96LB2 322 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 CPNE1Q99829 537 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 C19orf43Q9BQ61 176 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 POLMQ9NP87 494 aaPredicted RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 CATSPERZQ9NTU4 200 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 NSMCE4AQ9NXX6 385 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 MARCH4Q9P2E8 410 aaPredicted RBP21.33■■□□□ 1
R3HCC1-208ENST00000522012 SERGEFQ9UGK8 458 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 FADS3Q9Y5Q0 445 aa21.33■■□□□ 1
R3HCC1-208ENST00000522012 H7C0S8 307 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 SYF2O95926 243 aaKnown RBP21.32■■□□□ 1
R3HCC1-208ENST00000522012 ACADMP11310 421 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 SPAM1P38567 509 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 SLC1A2P43004 574 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 SPINT3P49223 89 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 XIAPP98170 497 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 ZBTB16Q05516 673 aa21.32■■□□□ 1
R3HCC1-208ENST00000522012 PEX6Q13608 980 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms