RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 IGHA2P01877 340 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 LINC00032P0C843 101 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 PPARGP37231 505 aaPredicted RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 MRPS22P82650 360 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 MRPL58Q14197 206 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 C16orf89Q6UX73 402 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 STN1Q9H668 368 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 NPEPPSL1A6NEC2 478 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 NR5A2O00482 541 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 INPPL1O15357 1258 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 LDB2O43679 373 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 SOD2P04179 222 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 PRKAA2P54646 552 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 PABPC1LQ4VXU2 614 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 ATG14Q6ZNE5 492 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 GALNT4Q8N4A0 578 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 SIDT2Q8NBJ9 832 aaKnown RBP11.35□□□□□ -0.59
CLK4-206ENST00000520878 PIF1Q9H611 641 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 NMRK1Q9NWW6 199 aa11.35□□□□□ -0.59
CLK4-206ENST00000520878 DRGXA6NNA5 263 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 UGT1A6P19224 532 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 UGT1A1P22309 533 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 UGT1A4P22310 534 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 UGT1A3P35503 534 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 UGT1A5P35504 534 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ACAP2Q15057 778 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PPP1R3AQ16821 1122 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PLPP4Q5VZY2 271 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CYP2R1Q6VVX0 501 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 SHKBP1Q8TBC3 707 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 GRIN3AQ8TCU5 1115 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ZNF333Q96JL9 665 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PSKH2Q96QS6 385 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PANX3Q96QZ0 392 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 WDR41Q9HAD4 459 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 NEU3Q9UQ49 428 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ILVBLA1L0T0 632 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 WASH4PA8MWX3 477 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ANKRD66B4E2M5 251 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PSMD12O00232 456 aaPredicted RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 TEX28O15482 410 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 ZCCHC18P0CG32 403 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 AOC1P19801 751 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 LEPRP48357 1165 aaKnown RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 PTK2BQ14289 1009 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ANKS6Q68DC2 871 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 AFTPHQ6ULP2 937 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CPNE9Q8IYJ1 553 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CLDN19Q8N6F1 224 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 HJURPQ8NCD3 748 aaPredicted RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 STAG3L4Q8TBR4 150 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 LINGO1Q96FE5 620 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CIPCQ9C0C6 399 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PIDD1Q9HB75 910 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ZMYM5Q9UJ78 669 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CDH22Q9UJ99 828 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 INSL5Q9Y5Q6 135 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CAPN14A8MX76 684 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CDC7O00311 574 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 MMP2P08253 660 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ANPEPP15144 967 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 AKT1P31749 480 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PEX19P40855 299 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 IL2P60568 153 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 ECT2LQ008S8 904 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 GPNMBQ14956 572 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 NET1Q7Z628 596 aaPredicted RBP11.34□□□□□ -0.59
CLK4-206ENST00000520878 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLK4-206ENST00000520878 MAGEC3Q8TD91 643 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PLD4Q96BZ4 506 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 CNDP1Q96KN2 507 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 BCAP29Q9UHQ4 241 aa11.34□□□□□ -0.59
CLK4-206ENST00000520878 PPP6CO00743 305 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 ANGPT2O15123 496 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 KDELR3O43731 214 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 TPST1O60507 370 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 MAGEC1O60732 1142 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 C8AP07357 584 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 ATXN1LP0C7T5 689 aaKnown RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 PKMP14618 531 aaKnown RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 HOXD9P28356 352 aaPredicted RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 FUT11Q495W5 492 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CLEC14AQ86T13 490 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CMTM8Q8IZV2 173 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 OR9I1Q8NGQ6 314 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms