RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DPPA4Q7L190 304 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 CHERPQ8IWX8 916 aaKnown RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 DSELQ8IZU8 1212 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 IGSF8Q969P0 613 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 ARHGEF26Q96DR7 871 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 CSF3RQ99062 836 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 UBA5Q9GZZ9 404 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 C1RLQ9NZP8 487 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 RNASEH2AO75792 299 aaKnown RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 EIF4A2Q14240 407 aaKnown RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 OASLQ15646 514 aaKnown RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 ATP13A5Q4VNC0 1218 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 GGNBP1Q5YKI7 109 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 ZNF324BQ6AW86 544 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 RHBDF2Q6PJF5 856 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 OR2AK2Q8NG84 335 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 SPATA22Q8NHS9 363 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 ARHGEF2Q92974 986 aaKnown RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 TMEM68Q96MH6 324 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 ACOX2Q99424 681 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 SH3GL2Q99962 352 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 CHCHD6Q9BRQ6 235 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 TM6SF1Q9BZW5 370 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 PDZD7Q9H5P4 517 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 GAREM1Q9H706 876 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 EHD2Q9NZN4 543 aa6.13□□□□□ -1.43
PTPN12-213ENST00000519553 CORO1CQ9ULV4 474 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 TRIP12Q14669 1992 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-213ENST00000519553 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 C4orf47A7E2U8 309 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 PAPSS2O95340 614 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 ACADMP11310 421 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 CDH2P19022 906 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 NFKBIAP25963 317 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 TM4SF1P30408 202 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 CLCN3P51790 818 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 GOLGA8DPQ0D2H9 430 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 NIPAL4Q0D2K0 466 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 MAPRE1Q15691 268 aaKnown RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 SLC36A4Q6YBV0 504 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 OR14L1PQ8NHC6 308 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 WFIKKN2Q8TEU8 576 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 NUDCD2Q8WVJ2 157 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 RRNAD1Q96FB5 475 aaKnown RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 MEIS3Q99687 375 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 ATXN2Q99700 1313 aaKnown RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 KXD1Q9BQD3 176 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 SLC28A3Q9HAS3 691 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 RANGRFQ9HD47 186 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-213ENST00000519553 LTB4R2Q9NPC1 389 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 BLOC1S4Q9NUP1 217 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 NFS1Q9Y697 457 aa6.12□□□□□ -1.43
PTPN12-213ENST00000519553 PROB1E7EW31 1015 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 DDNO94850 711 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 KDM4BO94953 1096 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 ZBTB11O95625 1053 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 ARL3P36405 182 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 HNRNPH2P55795 449 aaKnown RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 ECT2LQ008S8 904 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 SOWAHCQ53LP3 525 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 C9orf57Q5W0N0 161 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 NADSYN1Q6IA69 706 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 WDR73Q6P4I2 378 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 SEPT14Q6ZU15 432 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 ARMC9Q7Z3E5 817 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 USP6NLQ92738 828 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 C1orf74Q96LT6 269 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 TTC7AQ9ULT0 858 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-213ENST00000519553 SNX9Q9Y5X1 595 aa6.11□□□□□ -1.43
PTPN12-213ENST00000519553 A8MZ25 164 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-213ENST00000519553 HCRTR2O43614 444 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 PTP4A3O75365 173 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 RFPL2O75678 378 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 CLDN14O95500 239 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
PTPN12-213ENST00000519553 LINC00271P0C7V0 271 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 ART1P52961 327 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 DLG1Q12959 904 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 MAMLD1Q13495 774 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 CALCRLQ16602 461 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 CTF1Q16619 201 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 ZNF280DQ6N043 979 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 KCTD18Q6PI47 426 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-213ENST00000519553 IKBIPQ70UQ0 350 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 C16orf82Q7Z2V1 217 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 PDILTQ8N807 584 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 LILRB1Q8NHL6 650 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-213ENST00000519553 RTP4Q96DX8 246 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 PCGF1Q9BSM1 259 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 SEBOXQ9HB31 216 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-213ENST00000519553 HCFC1R1Q9NWW0 138 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 PNMA2Q9UL42 364 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 MAU2Q9Y6X3 613 aa6.1□□□□□ -1.43
PTPN12-213ENST00000519553 C1orf226A1L170 272 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 SLC25A12O75746 678 aa6.09□□□□□ -1.43
PTPN12-213ENST00000519553 SRCP12931 536 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms