RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	STN1	Q9H668	368 aa	Known RBP	2.57	□□□□□ -2
PCM1-208	ENST00000518877	MKKS	Q9NPJ1	570 aa	Predicted RBP	2.57	□□□□□ -2
PCM1-208	ENST00000518877	RPS10P5	Q9NQ39	176 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	HCFC1R1	Q9NWW0	138 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	TMEM160	Q9NX00	188 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	KIF17	Q9P2E2	1029 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	PADI1	Q9ULC6	663 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	GPR52	Q9Y2T5	361 aa		2.57	□□□□□ -2
PCM1-208	ENST00000518877	MEIOC	A2RUB1	952 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	VWA3A	A6NCI4	1184 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	SH2D7	A6NKC9	451 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	HHLA1	C9JL84	531 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	G6PD	P11413	515 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	ETFA	P13804	333 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	AGA	P20933	346 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	GNL1	P36915	607 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	USP8	P40818	1118 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	EIF2S3	P41091	472 aa	Known RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	CLK1	P49759	484 aa	Known RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	CLCNKA	P51800	687 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	EFNA5	P52803	228 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	YWHAZ	P63104	245 aa	Known RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	CTF1	Q16619	201 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	KRT24	Q2M2I5	525 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	ZNF667	Q5HYK9	610 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	CCNYL2	Q5T2Q4	361 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	SFMBT2	Q5VUG0	894 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	LRRC8E	Q6NSJ5	796 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	RGMB	Q6NW40	437 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	SLC36A4	Q6YBV0	504 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	LDHAL6A	Q6ZMR3	332 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	NOTCH2NL	Q7Z3S9	236 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	C2CD5	Q86YS7	1000 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	CPO	Q8IVL8	374 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	RNF113B	Q8IZP6	322 aa	Known RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	TMEM57	Q8N5G2	664 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	ANKRD52	Q8NB46	1076 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	SCCPDH	Q8NBX0	429 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	TRIM58	Q8NG06	486 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	LTV1	Q96GA3	475 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	LRR1	Q96L50	414 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	ZNF570	Q96NI8	536 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	LBHD1	Q9BQE6	289 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-208	ENST00000518877	EPHX3	Q9H6B9	360 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	RCOR1	Q9UKL0	485 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	GDA	Q9Y2T3	454 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877	STON1	Q9Y6Q2	735 aa		2.56	□□□□□ -2
PCM1-208	ENST00000518877		A0A0J9YWU9	116 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	hCG_1642624	A0A1W2PR95	340 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	GOLGA6L9	A6NEM1	432 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	SMCHD1	A6NHR9	2005 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	PEX12	O00623	359 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	KLK10	O43240	276 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	ANP32C	O43423	234 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	IGLV1-44	P01699	117 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	MMP2	P08253	660 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	CYC1	P08574	325 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	CNP	P09543	421 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	MYOD1	P15172	320 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	CORO1A	P31146	461 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	HOXA1	P49639	335 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	CCR5	P51681	352 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	TERF1	P54274	439 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	HNRNPH2	P55795	449 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	BIRC2	Q13490	618 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	TDG	Q13569	410 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	EIF2S3L	Q2VIR3	472 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	GRAMD1B	Q3KR37	738 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	TCTE1	Q5JU00	501 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	GPATCH4	Q5T3I0	446 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	HIST2H2BD	Q6DRA6	164 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	SLC27A1	Q6PCB7	646 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	ASB18	Q6ZVZ8	466 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	TAOK1	Q7L7X3	1001 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	FAM160B2	Q86V87	743 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	FAM222B	Q8WU58	562 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	STAM	Q92783	540 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	ART5	Q96L15	291 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	PAGR1	Q9BTK6	254 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	TRIM15	Q9C019	465 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	FKRP	Q9H9S5	495 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	UPF2	Q9HAU5	1272 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	SUFU	Q9UMX1	484 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	CARD8	Q9Y2G2	431 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	AMDHD2	Q9Y303	409 aa		2.55	□□□□□ -2
PCM1-208	ENST00000518877	RRP7A	Q9Y3A4	280 aa	Known RBP	2.55	□□□□□ -2
PCM1-208	ENST00000518877	NDUFAF8	A1L188	74 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	CTAGE9	A4FU28	777 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	NR5A2	O00482	541 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	CTAGE8	P0CG41	777 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	DCT	P40126	519 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	HAL	P42357	657 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	ISL1	P61371	349 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	GNB1	P62873	340 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	GRIK3	Q13003	919 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	GTF2H2	Q13888	395 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	NAA25	Q14CX7	972 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	C2orf68	Q2NKX9	166 aa		2.54	□□□□□ -2
PCM1-208	ENST00000518877	GTF2H2C	Q6P1K8	395 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms