RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FAM122CQ6P4D5 195 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 B3GNT6Q6ZMB0 384 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CACNA2D4Q7Z3S7 1137 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 HAPLN4Q86UW8 402 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 SPATA2LQ8IUW3 424 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 HACE1Q8IYU2 909 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 RNF168Q8IYW5 571 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 DSELQ8IZU8 1212 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 PDILTQ8N807 584 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CREB3L4Q8TEY5 395 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 USP6NLQ92738 828 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 PPP1R13BQ96KQ4 1090 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 MEIS3Q99687 375 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 SEPT5Q99719 369 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 KCNN2Q9H2S1 579 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 NDST4Q9H3R1 872 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 PDZD7Q9H5P4 517 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 MMP25Q9NPA2 562 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CNGB3Q9NQW8 809 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 TBC1D22BQ9NU19 505 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 PNMA2Q9UL42 364 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 TTC7AQ9ULT0 858 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 MTMR6Q9Y217 621 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 MAU2Q9Y6X3 613 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 IKBKBO14920 756 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 PLRG1O43660 514 aaKnown RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 NDUFS7O75251 213 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 MLYCDO95822 493 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 DAOP14920 347 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 TM4SF1P30408 202 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 FASLGP48023 281 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 DSCR9P59020 149 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 TUBA1BP68363 451 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 IRX6P78412 446 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 TFAP4Q01664 338 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 CEBPZQ03701 1054 aaKnown RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 GRIK2Q13002 908 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 CRYMQ14894 314 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 NFATC4Q14934 902 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 MED22Q15528 200 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 OASLQ15646 514 aaKnown RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 ATP13A5Q4VNC0 1218 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 SIGIRRQ6IA17 410 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 MZT2BQ6NZ67 158 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 GLDNQ6ZMI3 551 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 IKBIPQ70UQ0 350 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 ZNF114Q8NC26 417 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 WASF1Q92558 559 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 NEUROG1Q92886 237 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 IGSF8Q969P0 613 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 TIGD1Q96MW7 591 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 WDFY2Q96P53 400 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 FIZ1Q96SL8 496 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 KXD1Q9BQD3 176 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 CHCHD6Q9BRQ6 235 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 TM6SF1Q9BZW5 370 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 PPP1R3EQ9H7J1 279 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 POLR1BQ9H9Y6 1135 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 PLEKHA5Q9HAU0 1116 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 PCDH9Q9HC56 1237 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 RANGRFQ9HD47 186 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 EIF2B3Q9NR50 452 aaKnown RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 BLOC1S4Q9NUP1 217 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 UBA2Q9UBT2 640 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 SLC9A2Q9UBY0 812 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 CNOT8Q9UFF9 292 aaKnown RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 CORO1CQ9ULV4 474 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-207ENST00000518569 NFS1Q9Y697 457 aa3.71□□□□□ -1.82
VPS13B-207ENST00000518569 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 A8MZ25 164 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 SLC28A2O43868 658 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 HNRNPCL1O60812 293 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 PTP4A3O75365 173 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 JRKO75564 520 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 RFPL2O75678 378 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 NKX2-2O95096 273 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 G6PDP11413 515 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 IL7RP16871 459 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 ITGB8P26012 769 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 MAPK4P31152 587 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 EIF2S3P41091 472 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 CLNS1AP54105 237 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 HNRNPH2P55795 449 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KRTAP10-9P60411 292 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KIF5AQ12840 1032 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 AIMP2Q13155 320 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KEAP1Q14145 624 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 DHX34Q14147 1143 aaKnown RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 CALCRLQ16602 461 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 CDONQ4KMG0 1287 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 FRG2Q64ET8 278 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 HIST2H2BCQ6DN03 193 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 HIST2H2BDQ6DRA6 164 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 TMEM154Q6P9G4 183 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KLHL35Q6PF15 583 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KCTD18Q6PI47 426 aaPredicted RBP3.7□□□□□ -1.82
VPS13B-207ENST00000518569 KRBA2Q6ZNG9 492 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 SEPT14Q6ZU15 432 aa3.7□□□□□ -1.82
VPS13B-207ENST00000518569 DPPA4Q7L190 304 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms