RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PIRTP0C851 137 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 CEACAM1P13688 526 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 NME1P15531 152 aaKnown RBP21.95■■□□□ 1.1
VEGFA-217ENST00000518538 HTR1BP28222 390 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 TEAD1P28347 426 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 GRK6P43250 576 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 NOVA1P51513 510 aaKnown RBP21.95■■□□□ 1.1
VEGFA-217ENST00000518538 KIAA1024LP59773 190 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 BNIP3Q12983 259 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 EIF2B5Q13144 721 aaKnown RBP21.95■■□□□ 1.1
VEGFA-217ENST00000518538 SNX1Q13596 522 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 P3H1Q32P28 736 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 KANSL1Q7Z3B3 1105 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 NLRP8Q86W28 1048 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 KLHDC8BQ8IXV7 354 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 RASGEF1CQ8N431 466 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 SLC25A41Q8N5S1 370 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 SETD7Q8WTS6 366 aaKnown RBP21.95■■□□□ 1.1
VEGFA-217ENST00000518538 ABCG8Q9H221 673 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 WDR26Q9H7D7 661 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 PKD2L2Q9NZM6 624 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 CD84Q9UIB8 345 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 PCOLCE2Q9UKZ9 415 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.95■■□□□ 1.1
VEGFA-217ENST00000518538 KNL1Q8NG31 2342 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 RGSL1A5PLK6 1076 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 H3BM21 787 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 CACNB4O00305 520 aaPredicted RBP21.94■■□□□ 1.1
VEGFA-217ENST00000518538 SDC3O75056 442 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 FGF1P05230 155 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 ADRA1AP35348 466 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 CHRNA4P43681 627 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 SPINT3P49223 89 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 HNRNPKP61978 463 aaKnown RBP eCLIP21.94■■□□□ 1.11e-6■■■■■ 33.6
VEGFA-217ENST00000518538 ZNF542PQ5EBM4 170 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 RAET1GQ6H3X3 334 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 PSAPL1Q6NUJ1 521 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 TMC3Q7Z5M5 1100 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 ATL2Q8NHH9 583 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 FUBP1Q96AE4 644 aaKnown RBP21.94■■□□□ 1.1
VEGFA-217ENST00000518538 AP2M1Q96CW1 435 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 EID2BQ96D98 161 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 CAMK1GQ96NX5 476 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 FICDQ9BVA6 458 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 SHOC2Q9UQ13 582 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 BTBD3Q9Y2F9 522 aa21.94■■□□□ 1.1
VEGFA-217ENST00000518538 GOLGA6CA6NDK9 693 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 GOLGA6BA6NDN3 693 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 CBFA2T3O75081 653 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 PIAS2O75928 621 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 AGTP01019 485 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 PYGLP06737 847 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 GOLGA6DP0CG33 693 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 PPM1JQ5JR12 505 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 RANBP10Q6VN20 620 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 BAHD1Q8TBE0 780 aaPredicted RBP21.93■■□□□ 1.1
VEGFA-217ENST00000518538 RHBDD1Q8TEB9 315 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 SCAMP4Q969E2 229 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 WDR92Q96MX6 357 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 OSBPL9Q96SU4 736 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 TEX101Q9BY14 249 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 GPR63Q9BZJ6 419 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 TRABDQ9H4I3 376 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 PHPT1Q9NRX4 125 aaPredicted RBP21.93■■□□□ 1.1
VEGFA-217ENST00000518538 HOMER3Q9NSC5 361 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 GOLGA6AQ9NYA3 693 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 HACD3Q9P035 362 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 KLF15Q9UIH9 416 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 TTC7AQ9ULT0 858 aaPredicted RBP21.93■■□□□ 1.1
VEGFA-217ENST00000518538 SNX12Q9UMY4 172 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 SPO11Q9Y5K1 396 aa21.93■■□□□ 1.1
VEGFA-217ENST00000518538 PDE2AO00408 941 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-217ENST00000518538 METTL18O95568 372 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 MYCLP1P12525 358 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-217ENST00000518538 JUNDP17535 347 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 KELP23276 732 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 DGKAP23743 735 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 GPR1P46091 355 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 CDK3Q00526 305 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 PPARDQ03181 441 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 ENPP7Q6UWV6 458 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 HEATR4Q86WZ0 1026 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 PHACTR4Q8IZ21 702 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 BTN2A2Q8WVV5 523 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 LRRC45Q96CN5 670 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 RIOK2Q9BVS4 552 aaKnown RBP21.92■■□□□ 1.1
VEGFA-217ENST00000518538 LGR4Q9BXB1 951 aa21.92■■□□□ 1.1
VEGFA-217ENST00000518538 PNMA8BQ9ULN7 279 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-217ENST00000518538 DRG1Q9Y295 367 aaKnown RBP21.92■■□□□ 1.1
VEGFA-217ENST00000518538 DCHS1Q96JQ0 3298 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 CES2O00748 559 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 GIPC1O14908 333 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 SOD1P00441 154 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 IFNB1P01574 187 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 SLC4A1P02730 911 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 KCNA4P22459 653 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 ACTN2P35609 894 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 BLKP51451 505 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 DCDC1P59894 354 aa21.91■■□□□ 1.1
VEGFA-217ENST00000518538 GNG11P61952 73 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms