RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RASGRP3Q8IV61 690 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC103Q8IW40 242 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC36Q8IYA8 594 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GRAMD1CQ8IYS0 662 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DCP1BQ8IZD4 617 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADGRG5Q8IZF4 528 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TAGAPQ8N103 731 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PARP8Q8N3A8 854 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC185Q8N715 623 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM71DQ8N9W8 422 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TTC29Q8NA56 475 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 LEMD2Q8NC56 503 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SRFBP1Q8NEF9 429 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR7G3Q8NG95 312 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR4D10Q8NGI6 311 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR6P1Q8NGX9 317 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FBXO30Q8TB52 745 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SETD7Q8WTS6 366 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DNAJA4Q8WW22 397 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RFFLQ8WZ73 363 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 AKAP1Q92667 903 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 UFD1Q92890 307 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GLG1Q92896 1179 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLCO2A1Q92959 643 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NKD2Q969F2 451 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TOP1MTQ969P6 601 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RELTQ969Z4 430 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RAD51AP1Q96B01 352 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TESCQ96BS2 214 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TUBGCP3Q96CW5 907 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NXPE2Q96DL1 559 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SHDQ96IW2 340 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZFYVE19Q96K21 471 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TEKT5Q96M29 485 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DACH2Q96NX9 599 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DCUN1D5Q9BTE7 237 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF416Q9BWM5 594 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GTPBP2Q9BX10 602 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 AP1M1Q9BXS5 423 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANKRD60Q9BZ19 345 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 POLR1EQ9GZS1 481 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRABDQ9H4I3 376 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZCCHC4Q9H5U6 513 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NARFLQ9H6Q4 476 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GAREM1Q9H706 876 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ELAC1Q9H777 363 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP26B1Q9NR63 512 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KCNH7Q9NS40 1196 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 UFSP2Q9NUQ7 469 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ASNSD1Q9NWL6 643 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SMOXQ9NWM0 555 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 EIF3KQ9UBQ5 218 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF69Q9UC07 566 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DPP7Q9UHL4 492 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ENOPH1Q9UHY7 261 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 AGTPBP1Q9UPW5 1226 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GINS2Q9Y248 185 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 INVSQ9Y283 1065 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NDUFAF1Q9Y375 327 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PCDHGA8Q9Y5G5 932 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ANKRD26Q9UPS8 1709 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FRMPD1Q5SYB0 1578 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 MYH4Q9Y623 1939 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHD1O14646 1710 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ASTN2O75129 1339 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A1B0GVM2 712 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A1W2PQH9 124 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLC9B1P1A6NJY1 282 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 A8MX80 341 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 B4E1Z4 1266 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 H0Y626 953 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 STMND1H3BQB6 276 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 HRKO00198 91 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 TBX3O15119 743 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 SOX30O94993 753 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARIH2O95376 493 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CFBP00751 764 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 FGGP02679 453 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 HRGP04196 525 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 IFNA4P05014 189 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP17A1P05093 508 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 JUNP05412 331 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP21A2P08686 494 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PSKH1P11801 424 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ICAM2P13598 275 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ENO3P13929 434 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP11B1P15538 503 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 TSHRP16473 764 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CKMT2P17540 419 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARF4P18085 180 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 PI3P19957 117 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 C4BPBP20851 252 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 NR4A1P22736 598 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 S100PP25815 95 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 CDH5P33151 784 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 EIF2DP41214 584 aaKnown RBP4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 HTR2BP41595 481 aa4.81□□□□□ -1.64
HMGB1P19-201ENST00000517578 BTDP43251 543 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms