RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ANGPTL8Q6UXH0 198 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SAMD7Q7Z3H4 446 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SVOPLQ8N434 492 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NKAPQ8N5F7 415 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 OR52K2Q8NGK3 314 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 KLHL32Q96NJ5 620 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 FAM193BQ96PV7 902 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 REXO4Q9GZR2 422 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 OCEL1Q9H607 264 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NUMBLQ9Y6R0 609 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 FUOMA2VDF0 154 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 IFRD1O00458 451 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC22A1O15245 554 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 IDH3BO43837 385 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NDUFS2O75306 463 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 MFN2O95140 757 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 RASAL1O95294 804 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TFPTP0C1Z6 253 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CCNCP24863 283 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 GMPSP49915 693 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 POLR2JP52435 117 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 RELAQ04206 551 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC10A2Q12908 348 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SOWAHAQ2M3V2 549 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 MFSD4BQ5TF39 518 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 PRAMEF18Q5VWM3 479 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 C9orf57Q5W0N0 161 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SDE2Q6IQ49 451 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ESRP1Q6NXG1 681 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 DCLRE1AQ6PJP8 1040 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM135Q86UB9 458 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 METTL25Q8N6Q8 603 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ATP6V0D2Q8N8Y2 350 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 MCFD2Q8NI22 146 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 AKT1S1Q96B36 256 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC10A4Q96EP9 437 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 FCRL3Q96P31 734 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TSPAN18Q96SJ8 248 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 EXOSC4Q9NPD3 245 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 IMPAD1Q9NX62 359 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 INVSQ9Y283 1065 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 A8MT66 165 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 H0YAE9 185 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 H3BRB1 525 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 BTN3A1O00481 513 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 STAU1O95793 577 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ODC1P11926 461 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC1A2P43004 574 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CCR10P46092 362 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 WNT3AP56704 352 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 APOFQ13790 326 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 GRIK4Q16099 956 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ZRANB3Q5FWF4 1079 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 PAGE2Q7Z2X7 111 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SYTL1Q8IYJ3 562 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 KBTBD8Q8NFY9 601 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SPPL2BQ8TCT7 592 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NTAN1Q96AB6 310 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 LRRC58Q96CX6 371 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF778Q96MU6 729 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 BBS2Q9BXC9 721 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TUT1Q9H6E5 874 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CATSPERZQ9NTU4 200 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NUDT5Q9UKK9 219 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM247A6NEH6 219 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 K7EPI3 171 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 GRID2O43424 1007 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 UGT2B11O75310 529 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 AHSGP02765 367 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 LGALS2P05162 132 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 RAP2AP10114 183 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 AKAP5P24588 427 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 GRK3P35626 688 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 HCAR3P49019 387 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 HLCSP50747 726 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TUBB3Q13509 450 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TOMM20Q15388 145 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TGFBIQ15582 683 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 CCDC142Q17RM4 750 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 SGO1Q5FBB7 561 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ARMC4Q5T2S8 1044 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PTRHD1Q6GMV3 140 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 OGFOD2Q6N063 350 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ARHGAP36Q6ZRI8 547 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 P2RY8Q86VZ1 359 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM192Q8IY95 271 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 OR8H2Q8N162 312 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 MTMR14Q8NCE2 650 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF540Q8NDQ6 660 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 CLEC4CQ8WTT0 213 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PROX1Q92786 737 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 SLC47A1Q96FL8 570 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 FBXL20Q96IG2 436 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 KIFC1Q9BW19 673 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 MROH8Q9H579 483 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ARMC1Q9NVT9 282 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 SMOXQ9NWM0 555 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 WWOXQ9NZC7 414 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms