RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CPNE5Q9HCH3 593 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MBNL1Q9NR56 388 aaKnown RBP3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 OLAHQ9NV23 265 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ASB6Q9NWX5 421 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MTMR10Q9NXD2 777 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CISD1Q9NZ45 108 aaKnown RBP3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ACAD8Q9UKU7 415 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 LAMP3Q9UQV4 416 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 BTBD3Q9Y2F9 522 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FRMD4BQ9Y2L6 1034 aa3.31□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ARHGEF40Q8TER5 1519 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ZNF644Q9H582 1327 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 EDDM13A0A1B0GTR0 161 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GRID2IPA4D2P6 1211 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TMEM202A6NGA9 273 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WIPF3A6NGB9 483 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 OR6C76A6NM76 312 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MAGEB17A8MXT2 336 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 AKR1B15C9JRZ8 316 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HSPB6O14558 160 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WDR46O15213 610 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 IPO8O15397 1037 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PRPF4O43172 522 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KIF1CO43896 1103 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SYNCRIPO60506 623 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 JRKO75564 520 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KCNK5O95279 499 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CELF2O95319 508 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TOP3BO95985 862 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HIST1H2ABP04908 130 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 LCKP06239 509 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CYC1P08574 325 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CBSLP0DN79 551 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 INSRRP14616 1297 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HIST1H2ADP20671 130 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CBSP35520 551 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KRT2P35908 639 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 AMPHP49418 695 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CLK1P49759 484 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC12A2P55011 1212 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CDH13P55290 713 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PPP2R2BQ00005 443 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 YWHAHQ04917 246 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 COASYQ13057 564 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ODF2Q5BJF6 829 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 NHSL2Q5HYW2 709 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 AKNAD1Q5T1N1 836 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 DAB2IPQ5VWQ8 1189 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TEX38Q6PEX7 206 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 IYDQ6PHW0 289 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PQLC2Q6ZP29 291 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HIST3H2AQ7L7L0 130 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 OTOAQ7RTW8 1153 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GRASPQ7Z6J2 395 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 LDB1Q86U70 411 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ADIPOR2Q86V24 386 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TMC8Q8IU68 726 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WDR63Q8IWG1 891 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HACE1Q8IYU2 909 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FBXO39Q8N4B4 442 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC25A41Q8N5S1 370 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 IQUBQ8NA54 791 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SPC24Q8NBT2 197 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 BEST2Q8NFU1 509 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 OSR1Q8TAX0 266 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WIPF2Q8TF74 440 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 RSPH1Q8WYR4 309 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MAP4K1Q92918 833 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PTP4A1Q93096 173 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ERGIC1Q969X5 290 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 EME1Q96AY2 570 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MOAP1Q96BY2 351 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ZNF503Q96F45 646 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HARBI1Q96MB7 349 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ZNF570Q96NI8 536 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 NUDCD1Q96RS6 583 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ACOX2Q99424 681 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PCGF1Q9BSM1 259 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC25A23Q9BV35 468 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 RTN4RQ9BZR6 473 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLCO5A1Q9H2Y9 848 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CNOT10Q9H9A5 744 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TRPV4Q9HBA0 871 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GPR108Q9NPR9 543 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PAPOLBQ9NRJ5 636 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CYSLTR2Q9NS75 346 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 DDX43Q9NXZ2 648 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 COPG2Q9UBF2 871 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HACL1Q9UJ83 578 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FBXW11Q9UKB1 542 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ERVK-11Q9UQG0 969 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KCNK7Q9Y2U2 307 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WBP11Q9Y2W2 641 aaKnown RBP3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 LIPGQ9Y5X9 500 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 WNT6Q9Y6F9 365 aa3.3□□□□□ -1.88
SCARNA15.2-201ENST00000516409 C17orf102A2RUQ5 167 aa3.29□□□□□ -1.88
SCARNA15.2-201ENST00000516409 RTCAO00442 366 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms