RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 FUZQ9BT04 418 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 PLEKHA4Q9H4M7 779 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 C20orf141Q9NUB4 165 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 RCOR1Q9UKL0 485 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 SNED1Q8TER0 1413 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 GOLGA6L9A6NEM1 432 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 TMEM202A6NGA9 273 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 AKR1B15C9JRZ8 316 aaPredicted RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 NPHP1O15259 732 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 TFP02787 698 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 IFIT1P09914 478 aaKnown RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 HLA-DOBP13765 273 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 MAOAP21397 527 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 SHMT1P34896 483 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 EIF2S3P41091 472 aaKnown RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 VEGFCP49767 419 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 VAMP2P63027 116 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 TLE2Q04725 743 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 SLC20A2Q08357 652 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 TDGQ13569 410 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 RNPS1Q15287 305 aaKnown RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 CTF1Q16619 201 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 KRT24Q2M2I5 525 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 PLEKHA7Q6IQ23 1121 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 TAOK1Q7L7X3 1001 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 DSELQ8IZU8 1212 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 ZCCHC9Q8N567 271 aaKnown RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 RND1Q92730 232 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 FBXO17Q96EF6 278 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 LBHD1Q9BQE6 289 aaPredicted RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 HEMGNQ9BXL5 484 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 GPR63Q9BZJ6 419 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 KCNN2Q9H2S1 579 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 RRN3Q9NYV6 651 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 FAM96BQ9Y3D0 163 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 ZNF711Q9Y462 761 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.79
LINC01088-211ENST00000515597 PSAT1Q9Y617 370 aa3.84□□□□□ -1.79
LINC01088-211ENST00000515597 GAPVD1Q14C86 1478 aa3.84□□□□□ -1.8
LINC01088-211ENST00000515597 CCDC196A0A1B0GTZ2 297 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 A0A1W2PS18 150 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 CYC1P08574 325 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 G6PDP11413 515 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 CDH1P12830 882 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 XBP1P17861 261 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 METAP2P50579 478 aaKnown RBP eCLIP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 CLCNKAP51800 687 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 RELQ04864 619 aaPredicted RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 TRPC3Q13507 836 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 KCNT1Q5JUK3 1230 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 FBXO46Q6PJ61 603 aaPredicted RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 SLC22A25Q6T423 547 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 TMEM219Q86XT9 240 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 EPHX4Q8IUS5 362 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 WDR63Q8IWG1 891 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 ZBTB2Q8N680 514 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 MAELQ96JY0 434 aaKnown RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 EGLN1Q9GZT9 426 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 BPIFA1Q9NP55 256 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 PPP1R14DQ9NXH3 145 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 FBXO9Q9UK97 447 aaPredicted RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 LRRFIP2Q9Y608 721 aaKnown RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 PDS5AQ29RF7 1337 aaKnown RBP3.83□□□□□ -1.8
LINC01088-211ENST00000515597 PEG3Q9GZU2 1588 aa3.83□□□□□ -1.8
LINC01088-211ENST00000515597 EIF4G3O43432 1585 aaKnown RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 ASPDHA6ND91 283 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 RRN3P2A6NIE6 340 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 C16orf97H3BN30 126 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 NCAM2O15394 837 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 FGF17O60258 216 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 IRF1P10914 325 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 CETPP11597 493 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 COX7A2P14406 83 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 CD53P19397 219 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 S1PR1P21453 382 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 RRM1P23921 792 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 CNTFP26441 200 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 MARK3P27448 753 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 TMPOP42166 694 aaKnown RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 GABRB2P47870 512 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 ERVK11-1P61568 191 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 UFM1P61960 85 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 PITX1P78337 314 aaPredicted RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 PPP2R5BQ15173 497 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 FCN2Q15485 313 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 C2orf68Q2NKX9 166 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 EIF2S3LQ2VIR3 472 aaKnown RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 HSP90AB4PQ58FF6 505 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 LCTLQ6UWM7 567 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 GFRALQ6UXV0 394 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 SLC36A4Q6YBV0 504 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 RRM2BQ7LG56 351 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 ODF3L1Q8IXM7 274 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms