RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	ADGRG7	Q96K78	797 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	TEFM	Q96QE5	360 aa	Known RBP	4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	CHMP4A	Q9BY43	222 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	ISY1	Q9ULR0	285 aa	Known RBP	4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	LRRC37A	A6NMS7	1700 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	MED23	Q9ULK4	1368 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	UNC80	Q8N2C7	3258 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	COL1A1	P02452	1464 aa	Predicted RBP	4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	FOCAD	Q5VW36	1801 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	YDJC	A8MPS7	323 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	ECE2	O60344	883 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	SKAP2	O75563	359 aa	Predicted RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	HSP90AA1	P07900	732 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	CKMT1A	P12532	417 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	DAO	P14920	347 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	PTMS	P20962	102 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	CHML	P26374	656 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	RPS6KA3	P51812	740 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	UBXN2A	P68543	259 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	PDCL	Q13371	301 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	GRAP	Q13588	217 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	LRIT3	Q3SXY7	679 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	PGBD2	Q6P3X8	592 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	GRAPL	Q8TC17	118 aa	Predicted RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	ELAC2	Q9BQ52	826 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	PABPC3	Q9H361	631 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	PRO3102	Q9H379	93 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	ABHD16B	Q9H3Z7	469 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	DBNDD1	Q9H9R9	158 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYOZ2	Q9NPC6	264 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	TCF7L2	Q9NQB0	619 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	TMLHE	Q9NVH6	421 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	MTMR10	Q9NXD2	777 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	DBF4	Q9UBU7	674 aa	Predicted RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	DHDH	Q9UQ10	334 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYH8	P13535	1937 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	TTC41P	Q6P2S7	1318 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	MAP3K15	Q6ZN16	1313 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYO3B	Q8WXR4	1341 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	ABCC12	Q96J65	1359 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	HTT	P42858	3142 aa		4.61	□□□□□ -1.67
RUFY3-215	ENST00000515479	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	RANBP2	P49792	3224 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479		A0A087WV62	115 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479		A0A0B4J293	547 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	PI4KAP2	A4QPH2	592 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	SYT5	O00445	386 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	STRN	O43815	780 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	SOCS5	O75159	536 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	KRT36	O76013	467 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	CHN1	P15882	459 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	TCEA1	P23193	301 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	AVPR2	P30518	371 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	MXI1	P50539	228 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	PNLIPRP1	P54315	467 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	CUL4A	Q13619	759 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	CTTN	Q14247	550 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	HSP90AB3P	Q58FF7	597 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	TYW3	Q6IPR3	259 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	RRAGA	Q7L523	313 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	RFLNB	Q8N5W9	214 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	PI4KAP1	Q8N8J0	262 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	KIF1BP	Q96EK5	621 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	UTP14A	Q9BVJ6	771 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	NPFFR1	Q9GZQ6	430 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	PDCL3	Q9H2J4	239 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	MALT1	Q9UDY8	824 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	KCND3	Q9UK17	655 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	USP16	Q9Y5T5	823 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	BRCA2	P51587	3418 aa		4.6	□□□□□ -1.67
RUFY3-215	ENST00000515479	TARSL2	A2RTX5	802 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	PRC1	O43663	620 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	KIF1C	O43896	1103 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	BAG4	O95429	457 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	CBX6	O95503	412 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	TFRC	P02786	760 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	UMOD	P07911	640 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	ACP5	P13686	325 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	GPT	P24298	496 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	YWHAQ	P27348	245 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	PDIA3	P30101	505 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	HSPA4	P34932	840 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	SNTA1	Q13424	505 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	ZRSR1	Q15695	479 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	SCN9A	Q15858	1988 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	KRTAP24-1	Q3LI83	254 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	HSP90AB4P	Q58FF6	505 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	RUNDC3A	Q59EK9	446 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	DDX60L	Q5H9U9	1706 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	SLC10A5	Q5PT55	438 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	LIN54	Q6MZP7	749 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	FAM205A	Q6ZU69	1335 aa		4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	PATL1	Q86TB9	770 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-215	ENST00000515479	TMC8	Q8IU68	726 aa		4.59	□□□□□ -1.67

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