RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, human

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSPAN17-208	ENST00000514705	RAD51	Q06609	339 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	NPW	Q8N729	165 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CDYL2	Q8N8U2	506 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RNF39	Q9H2S5	420 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	HIPK3	Q9H422	1215 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	VRTN	Q9H8Y1	702 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ABI2	Q9NYB9	513 aa	Predicted RBP	13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	AFF4	Q9UHB7	1163 aa	Known RBP	13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	COL24A1	Q17RW2	1714 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TTC24	A2A3L6	582 aa	Predicted RBP	13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	C17orf102	A2RUQ5	167 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	UBXN8	O00124	270 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	JAK1	P23458	1154 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	LILRA4	P59901	499 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TNK2	Q07912	1038 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PAFAH1B3	Q15102	231 aa	Known RBP	13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ZRANB3	Q5FWF4	1079 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PIM3	Q86V86	326 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RPRD1A	Q96P16	312 aa	Predicted RBP	13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	HGH1	Q9BTY7	390 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ATAD3A	Q9NVI7	634 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TRIM17	Q9Y577	477 aa		13.89	□□□□□ -0.19
TSPAN17-208	ENST00000514705	VAC14	Q08AM6	782 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PSMD5	Q16401	504 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CENPL	Q8N0S6	344 aa	Predicted RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	APOL5	Q9BWW9	433 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	MAF1	Q9H063	256 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CXCL16	Q9H2A7	254 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FBXW11	Q9UKB1	542 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RNF11	Q9Y3C5	154 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TRIM43B	A6NCK2	446 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	AURKA	O14965	403 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	DLGAP3	O95886	979 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ALDH4A1	P30038	563 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RENBP	P51606	427 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	AARS2	Q5JTZ9	985 aa	Known RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	METTL6	Q8TCB7	284 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	SNX27	Q96L92	541 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FCRL2	Q96LA5	508 aa	Predicted RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	NPY6R	Q99463	290 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	IFT80	Q9P2H3	777 aa	Predicted RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	SH3PXD2B	A1X283	911 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ARPC2	O15144	300 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CAPG	P40121	348 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FGD3	Q5JSP0	725 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ANGPTL8	Q6UXH0	198 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TBATA	Q96M53	351 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TMEM74	Q96NL1	305 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	KCNA7	Q96RP8	456 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	DDX28	Q9NUL7	540 aa	Known RBP	13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	COMMD8	Q9NX08	183 aa		13.88	□□□□□ -0.19
TSPAN17-208	ENST00000514705	LHX1	P48742	406 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TUBA4A	P68366	448 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PABPC1L	Q4VXU2	614 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	GLYAT	Q6IB77	296 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CLEC20A	Q6ZU45	233 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CHID1	Q9BWS9	393 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ZMYM5	Q9UJ78	669 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ZNF26	P17031	533 aa	Predicted RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	DAOA	P59103	153 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RFTN1	Q14699	578 aa	Predicted RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ANKDD1A	Q495B1	522 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	LDLRAD1	Q5T700	205 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CRTC3	Q6UUV7	619 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TBC1D21	Q8IYX1	336 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PCSK9	Q8NBP7	692 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	SMARCD1	Q96GM5	515 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PPP1R2P1	Q96PQ5	205 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	HNRNPAB	Q99729	332 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TXNRD2	Q9NNW7	524 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	HMG20A	Q9NP66	347 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CNGB3	Q9NQW8	809 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TRMT6	Q9UJA5	497 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	PAGE1	O75459	146 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FKBP9	O95302	570 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	POMC	P01189	267 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TH	P07101	528 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	MAG	P20916	626 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	DAB2	P98082	770 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ECT2L	Q008S8	904 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RAB39A	Q14964	217 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ATG14	Q6ZNE5	492 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FKBP9P1	Q75LS8	142 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RBM12B	Q8IXT5	1001 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CRYBG2	Q8N1P7	616 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CPSF7	Q8N684	471 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RORB	Q92753	470 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	HPS1	Q92902	700 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	ACOX2	Q99424	681 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CDK5RAP2	Q96SN8	1893 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	RSL1D1	O76021	490 aa	Known RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	SLC2A4	P14672	509 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	CD68	P34810	354 aa	Predicted RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	FLT3LG	P49771	235 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	NRG1	Q02297	640 aa	Predicted RBP	13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	EFEMP1	Q12805	493 aa		13.87	□□□□□ -0.19
TSPAN17-208	ENST00000514705	TAC4	Q86UU9	113 aa		13.87	□□□□□ -0.19

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