RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RASGEF1CQ8N431 466 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 DEFB124Q8NES8 71 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 SCAMP4Q969E2 229 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 EID2BQ96D98 161 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 RTP4Q96DX8 246 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 CAMK1GQ96NX5 476 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 OSBPL9Q96SU4 736 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 ZFYVE1Q9HBF4 777 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 SNX12Q9UMY4 172 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
USP46-209ENST00000514536 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 ZNF711Q9Y462 761 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 SPO11Q9Y5K1 396 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 NCOR2Q9Y618 2525 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 YKT6O15498 198 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 SDC3O75056 442 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 SLC4A1P02730 911 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 ETS1P14921 441 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 HLA-DPA1P20036 260 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 TRIM23P36406 574 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 KCNJ1P48048 391 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 SPINT3P49223 89 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 OLIG2Q13516 323 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 NFATC4Q14934 902 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 P3H1Q32P28 736 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 FAXCQ5TGI0 409 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 DRICH1Q6PGQ1 229 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 ENPP7Q6UWV6 458 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 RANBP10Q6VN20 620 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PARGQ86W56 976 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 NAXDQ8IW45 347 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 NRSN1Q8IZ57 195 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 SAP25Q8TEE9 199 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 AP2M1Q96CW1 435 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PPP1R2P1Q96PQ5 205 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 WDR24Q96S15 920 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 SRPK1Q96SB4 655 aaKnown RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PKD2L2Q9NZM6 624 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 KLF15Q9UIH9 416 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 CACNB4O00305 520 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 GIPC1O14908 333 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 AURKAO14965 403 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 CSF2P04141 144 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 TSHRP16473 764 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 KCNA4P22459 653 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 HTR1BP28222 390 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 EPHA8P29322 1005 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 ADRA1AP35348 466 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 ACTN2P35609 894 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 GPR1P46091 355 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 DPTQ07507 201 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 MACC1Q6ZN28 852 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PRELID2Q8N945 189 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 GLIS1Q8NBF1 620 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 BLOC1S5Q8TDH9 187 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 AGAP2Q99490 1192 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 RIOK2Q9BVS4 552 aaKnown RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 LGR4Q9BXB1 951 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 FAM83DQ9H4H8 585 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 SLC32A1Q9H598 525 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 WDR26Q9H7D7 661 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 HOMER3Q9NSC5 361 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
USP46-209ENST00000514536 BTBD3Q9Y2F9 522 aa13.92□□□□□ -0.18
USP46-209ENST00000514536 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
USP46-209ENST00000514536 RGSL1A5PLK6 1076 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 ZNF185O15231 689 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 FLRT2O43155 660 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 USP12O75317 370 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 PIAS2O75928 621 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 KCNK5O95279 499 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 FGF1P05230 155 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 ZSCAN5DPP0CG00 497 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 JUNDP17535 347 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 DGKAP23743 735 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 NOVA1P51513 510 aaKnown RBP13.91□□□□□ -0.18
USP46-209ENST00000514536 ZNF765Q7L2R6 523 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 GSTA5Q7RTV2 222 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 RD3Q7Z3Z2 195 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 NLRP8Q86W28 1048 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 KLHDC8BQ8IXV7 354 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 RAVER1Q8IY67 606 aaKnown RBP13.91□□□□□ -0.18
USP46-209ENST00000514536 SLC25A45Q8N413 288 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 CCDC89Q8N998 374 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 TSACCQ96A04 125 aaPredicted RBP13.91□□□□□ -0.18
USP46-209ENST00000514536 WDR92Q96MX6 357 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms