RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 ISCUQ9H1K1 167 aa13.38□□□□□ -0.27
POLR2J3-217ENST00000513438 RDH14Q9HBH5 336 aa13.38□□□□□ -0.27
POLR2J3-217ENST00000513438 HEMK1Q9Y5R4 338 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-217ENST00000513438 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 RHPN2P1A8MT19 583 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 SMTNL1A8MU46 457 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ARHGAP6O43182 974 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ECEL1O95672 775 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 MYBL1P10243 752 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 RARAP10276 462 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 LIPCP11150 499 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 NFKBIAP25963 317 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 GNPDA1P46926 289 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 POLD2P49005 469 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ILF3Q12906 894 aaKnown RBP eCLIP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 LINC00303Q3SY05 128 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 MARC1Q5VT66 337 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ZNF574Q6ZN55 896 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 C17orf82Q86X59 251 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 BBS5Q8N3I7 341 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 SGF29Q96ES7 293 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 TRIM11Q96F44 468 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 CSPG4P5Q96PW8 444 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 TRNAU1APQ9NX07 287 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 TAAR2Q9P1P5 351 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 ST14Q9Y5Y6 855 aa13.37□□□□□ -0.27
POLR2J3-217ENST00000513438 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PGLSO95336 258 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 WISP1O95388 367 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 CPNE6O95741 557 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 CTPS1P17812 591 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 LHCGRP22888 699 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 MMP13P45452 471 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 CDK3Q00526 305 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 CTBSQ01459 385 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PIGHQ14442 188 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 C16orf72Q14CZ0 275 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 MANEAQ5SRI9 462 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 RAET1GQ6H3X3 334 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 TECPR1Q7Z6L1 1165 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 TSPAN33Q86UF1 283 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 ARHGAP9Q9BRR9 750 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 FOXJ2Q9P0K8 574 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PPIL1Q9Y3C6 166 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 PLEKHM1Q9Y4G2 1056 aa13.36□□□□□ -0.27
POLR2J3-217ENST00000513438 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 C9orf172C9J069 976 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 PSMD11O00231 422 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 PPM1DO15297 605 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 MBD3O95983 291 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 PDHA1P08559 390 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 CCL4P13236 92 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 CD1CP29017 333 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 ADCY8P40145 1251 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 GPR1P46091 355 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 CDH6P55285 790 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 ITKQ08881 620 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 BIRC2Q13490 618 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 NR1I3Q14994 352 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 RALGPS1Q5JS13 557 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 RFLNAQ6ZTI6 216 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 ZNF438Q7Z4V0 828 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 VASH2Q86V25 355 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 DTX1Q86Y01 620 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 NAGSQ8N159 534 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 RCBTB1Q8NDN9 531 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 EXTL1Q92935 676 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 BTBD6Q96KE9 485 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 SMIM14Q96QK8 99 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 MCCC1Q96RQ3 725 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 ABCG8Q9H221 673 aa13.35□□□□□ -0.27
POLR2J3-217ENST00000513438 NT5MQ9NPB1 228 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms