RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PPIP5K2O43314 1243 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 NDUFB8O95169 186 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 WNT1P04628 370 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 HOXB7P09629 217 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 ZNF853P0CG23 659 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 ACADMP11310 421 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 TBXAS1P24557 533 aaPredicted RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 EPHA8P29322 1005 aaPredicted RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 CCT4P50991 539 aaKnown RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 C21orf58P58505 322 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 RPS3AP61247 264 aaKnown RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 RPS8P62241 208 aaKnown RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 PTP4A2Q12974 167 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 CAPSQ13938 189 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 SLC10A5Q5PT55 438 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 INO80CQ6PI98 192 aaPredicted RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 PARM1Q6UWI2 310 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 COLCA1Q6ZS62 124 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 G2E3Q7L622 706 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 CCDC105Q8IYK2 499 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 SLC25A28Q96A46 364 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 VCPIP1Q96JH7 1222 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 ISCUQ9H1K1 167 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 SH2D4AQ9H788 454 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 WDR6Q9NNW5 1121 aaKnown RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 SPAG4Q9NPE6 437 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 CWC25Q9NXE8 425 aaPredicted RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 ZNF70Q9UC06 446 aaPredicted RBP4.38□□□□□ -1.71
HTT-210ENST00000512909 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 SQORQ9Y6N5 450 aa4.38□□□□□ -1.71
HTT-210ENST00000512909 SCN11AQ9UI33 1791 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 FSD2A1L4K1 749 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 A6NNC1 897 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 KDM4EB2RXH2 506 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 H0YGN5 161 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 SOCS2O14508 198 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 ITM2AO43736 263 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 CTPS1P17812 591 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 BSGP35613 385 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 PRELPP51888 382 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 PPATQ06203 517 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 GRAPQ13588 217 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 GPR18Q14330 331 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 FRG1Q14331 258 aaKnown RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 TNIP1Q15025 636 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TCTN1Q2MV58 587 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 CCDC152Q4G0S7 254 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 WASHC2DQ5SRD0 308 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TMEM154Q6P9G4 183 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TSSK4Q6SA08 328 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 FAM83HQ6ZRV2 1179 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 SLC16A12Q6ZSM3 486 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 Q6ZTK2 550 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 MON1BQ7L1V2 547 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TBC1D1Q86TI0 1168 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 DENND6AQ8IWF6 608 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 MMP21Q8N119 569 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 PLD5Q8N7P1 536 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 FRMD1Q8N878 549 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 CCDC191Q8NCU4 936 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 C1orf131Q8NDD1 294 aaKnown RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 GRAPLQ8TC17 118 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 BICD2Q8TD16 824 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 GTF3C6Q969F1 213 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 MOAP1Q96BY2 351 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 HARBI1Q96MB7 349 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 CLSTN3Q9BQT9 956 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 HEMGNQ9BXL5 484 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
HTT-210ENST00000512909 SMARCAD1Q9H4L7 1026 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 SYNCQ9H7C4 482 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 KRCC1Q9NPI7 259 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 HIF1ANQ9NWT6 349 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 HEY2Q9UBP5 337 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 HACL1Q9UJ83 578 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 HAO1Q9UJM8 370 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 ATP6V0A2Q9Y487 856 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.37□□□□□ -1.71
HTT-210ENST00000512909 KCNE2Q9Y6J6 123 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 C4AP0C0L4 1744 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TAF1LQ8IZX4 1826 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 UBR3Q6ZT12 1888 aa4.37□□□□□ -1.71
HTT-210ENST00000512909 TJP1Q07157 1748 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 N4BP2Q86UW6 1770 aaPredicted RBP4.36□□□□□ -1.71
HTT-210ENST00000512909 TMEM272A0A1B0GTI8 110 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 A0A1W2PPC1 479 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 RPS10-NUDT3A0A1W2PQS6 291 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 WIPF3A6NGB9 483 aa4.36□□□□□ -1.71
HTT-210ENST00000512909 C17orf100A8MU93 164 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms