RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ADAMTSL2Q86TH1 951 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 C2orf73Q8N5S3 287 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 ANKFN1Q8N957 763 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 EPS8L3Q8TE67 593 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 TSEN15Q8WW01 171 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 CLP1Q92989 425 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 SLC25A23Q9BV35 468 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 IL22Q9GZX6 179 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PLK2Q9NYY3 685 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 NDUFA13Q9P0J0 144 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PDP2Q9P2J9 529 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 HAO1Q9UJM8 370 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ERGIC3Q9Y282 383 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 MFHAS1Q9Y4C4 1052 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 TRPM3Q9HCF6 1732 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 H0YGN5 161 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PGRMC2O15173 223 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 NOL4O94818 638 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 SAGP10523 405 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 LAMP2P13473 410 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SLC7A1P30825 629 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZNF132P52740 706 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 RPL19P84098 196 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 DMPKQ09013 629 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SMARCB1Q12824 385 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PCBP1Q15365 356 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP38-203ENST00000511739 TAF5Q15542 800 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZDHHC20Q5W0Z9 365 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 RNF43Q68DV7 783 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZNF549Q6P9A3 640 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 VITQ6UXI7 678 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 RNF19BQ6ZMZ0 732 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 CHST15Q7LFX5 561 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 FAM129CQ86XR2 697 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 RBFAQ8N0V3 343 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZSCAN4Q8NAM6 433 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 LCN9Q8WX39 176 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SLC9A6Q92581 669 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 FAM129BQ96TA1 746 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 AARSD1Q9BTE6 412 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 IRX2Q9BZI1 471 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 PRDM16Q9HAZ2 1276 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 BATF3Q9NR55 127 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 NKIRAS2Q9NYR9 191 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 UBAP1Q9NZ09 502 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 FZD1Q9UP38 647 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ASNA1O43681 348 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 HCN1O60741 890 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SLC35G6P0C7Q6 338 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 GNALP38405 381 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 CRYBB1P53674 252 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DUSP4Q13115 394 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 NEDD8Q15843 81 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PAPD7Q5XG87 772 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 FAM151BQ6UXP7 276 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 CYP2R1Q6VVX0 501 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 GCNT7Q6ZNI0 430 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 UNC5BQ8IZJ1 945 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DHRSXQ8N5I4 330 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 FBXO15Q8NCQ5 510 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 PRCCQ92733 491 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 HIC2Q96JB3 615 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ZIM3Q96PE6 472 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 TEFMQ96QE5 360 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 C9orf16Q9BUW7 83 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PLGRKTQ9HBL7 147 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DUOX1Q9NRD9 1551 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 CYP3A7-CYP3A51PA0A087WV96 503 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 A0A1W2PRG6 482 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 IRF6O14896 467 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 ATG13O75143 517 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PTPN2P17706 415 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SLC6A2P23975 617 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 CYP3A7P24462 503 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 MAT2AP31153 395 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 RPL38P63173 70 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 SPIBQ01892 262 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PCDH1Q08174 1060 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 LARS2Q15031 903 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 CPSF6Q16630 551 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP38-203ENST00000511739 SWI5Q1ZZU3 235 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DACT2Q5SW24 774 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 MSANTD2Q6P1R3 559 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 WDR93Q6P2C0 686 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 GPR180Q86V85 440 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PSTKQ8IV42 348 aaKnown RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 KIAA0319LQ8IZA0 1049 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 PTGR2Q8N8N7 351 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 CHST4Q8NCG5 386 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 OR4A15Q8NGL6 344 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 OR6K2Q8NGY2 324 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 SPPL2BQ8TCT7 592 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 GPR152Q8TDT2 470 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 C11orf84Q9BUA3 381 aaPredicted RBP5.78□□□□□ -1.48
USP38-203ENST00000511739 ZCCHC17Q9NP64 241 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms