RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TTC3P53804 2025 aa3.82□□□□□ -1.8
TOPBP1-208ENST00000511439 FANCMQ8IYD8 2048 aa3.82□□□□□ -1.8
TOPBP1-208ENST00000511439 PIEZO2Q9H5I5 2752 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 SPTAN1Q13813 2472 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 FSD2A1L4K1 749 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 VWA3AA6NCI4 1184 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 RRN3P2A6NIE6 340 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 KCNJ18B7U540 433 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 C19orf81C9J6K1 198 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 DUSP11O75319 330 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 WNT1P04628 370 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 PCCAP05165 728 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 POLBP06746 335 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 ARSAP15289 507 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 EIF2S2P20042 333 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 SP100P23497 879 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 PAX3P23760 479 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 HOXD9P28356 352 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 CCKARP32238 428 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 CCR5P51681 352 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 RPS6KA3P51812 740 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 MVDP53602 400 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 BACE1P56817 501 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 RHAGQ02094 409 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 UBE3AQ05086 875 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 ZBTB16Q05516 673 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 ITGA7Q13683 1181 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 RBMS2Q15434 407 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 GXYLT1Q4G148 440 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 MIDNQ504T8 468 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 C10orf76Q5T2E6 689 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 C10orf25Q5T742 122 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 SLC30A9Q6PML9 568 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 FAM57BQ71RH2 274 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 KLBQ86Z14 1044 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 VPS52Q8N1B4 723 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 ZNF843Q8N446 348 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 PPP1R10Q96QC0 940 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 REEP2Q9BRK0 252 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 PIMREGQ9BSJ6 248 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 SCNM1Q9BWG6 230 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 TRPV6Q9H1D0 765 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 PAPOLBQ9NRJ5 636 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 TMEM184CQ9NVA4 438 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 THAP1Q9NVV9 213 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 BARX2Q9UMQ3 279 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 TNFSF13BQ9Y275 285 aa3.81□□□□□ -1.8
TOPBP1-208ENST00000511439 LAMA5O15230 3695 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TANC1Q9C0D5 1861 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 A0A1B0GVC2 190 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 HOXC11O43248 304 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 DHX16O60231 1041 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TSPAN3O60637 253 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CNOT3O75175 753 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 METTL18O95568 372 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 RETP07949 1114 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 IQCF3P0C7M6 154 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CYP4B1P13584 511 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TNNT1P13805 278 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CNTFP26441 200 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CTNNB1P35222 781 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CPA2P48052 419 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 NOVA1P51513 510 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 OAZ1P54368 228 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ID2Q02363 134 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ZNF91Q05481 1191 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TROAPQ12815 778 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 RUNDC3AQ59EK9 446 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ARL13AQ5H913 290 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 SPECC1Q5M775 1068 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 VWA5B1Q5TIE3 1220 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 SNRNP48Q6IEG0 339 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 CDC42EP5Q6NZY7 148 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 DENND1BQ6P3S1 775 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 MMS22LQ6ZRQ5 1243 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 IRF2BP2Q7Z5L9 587 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 GALNT7Q86SF2 657 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ADGRF4Q8IZF3 695 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ANKRD44Q8N8A2 993 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 NRACQ8N912 160 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 SPATA3Q8NHX4 192 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 C2CD4CQ8TF44 421 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 KAT2AQ92830 837 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 VCPIP1Q96JH7 1222 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 UPF3AQ9H1J1 476 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 Q9N2J8 555 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TLR8Q9NR97 1041 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 TMEM248Q9NWD8 314 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ARL15Q9NXU5 204 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 SLC25A13Q9UJS0 675 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 FBXO4Q9UKT5 387 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 SLC8A2Q9UPR5 921 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 NEUROG3Q9Y4Z2 214 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 ITPR3Q14573 2671 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 PTPRSQ13332 1948 aa3.8□□□□□ -1.8
TOPBP1-208ENST00000511439 FBN2P35556 2912 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 MROH7-TTC4A0A0A0MT08 1334 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 RELNP78509 3460 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 TRBV5-3A0A0A0MS03 114 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms