RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 BPIFB4P59827 614 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 YPEL5P62699 121 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SMAD3P84022 425 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FADDQ13158 208 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 RIN1Q13671 783 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 NR1D2Q14995 579 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 POLD3Q15054 466 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 KYAT1Q16773 422 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ADCK5Q3MIX3 580 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 WDR72Q3MJ13 1102 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TRIM61Q5EBN2 209 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GLRA4Q5JXX5 417 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ANKRD20A3Q5VUR7 823 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF772Q68DY9 489 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GRAMD4Q6IC98 578 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GGT6Q6P531 493 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF813Q6ZN06 617 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ARMCX2Q7L311 632 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 OTOAQ7RTW8 1153 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 NEK8Q86SG6 692 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GPR149Q86SP6 731 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 METTL23Q86XA0 190 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 C2CD5Q86YS7 1000 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 MAP7D3Q8IWC1 876 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TUSC5Q8IXB3 177 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM217AQ8IXS0 508 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 PM20D2Q8IYS1 436 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 KIAA2013Q8IYS2 634 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ZCCHC7Q8N3Z6 543 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CSGALNACT2Q8N6G5 542 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SETD9Q8NE22 299 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SPATA4Q8NEY3 305 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF397Q8NF99 534 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CMASQ8NFW8 434 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 OR8K5Q8NH50 307 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ANGPTL6Q8NI99 470 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 RAB3IL1Q8TBN0 382 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 WDR60Q8WVS4 1066 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 DNAJA4Q8WW22 397 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 LIPHQ8WWY8 451 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ST8SIA4Q92187 359 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TANKQ92844 425 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM162AQ96A26 154 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 RHBDF1Q96CC6 855 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM122AQ96E09 287 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CHAMP1Q96JM3 812 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CEP170P1Q96L14 293 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GBP5Q96PP8 586 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CYTH2Q99418 400 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 RIT2Q99578 217 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 KCNJ15Q99712 375 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 KCNS3Q9BQ31 491 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SF3B5Q9BWJ5 86 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 MRPL1Q9BYD6 325 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 B3GNT5Q9BYG0 378 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 THAP2Q9H0W7 228 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SLC26A1Q9H2B4 701 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 LHX5Q9H2C1 402 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SNX25Q9H3E2 840 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 NDST4Q9H3R1 872 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SH2D4AQ9H788 454 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TMEM206Q9H813 350 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ERVK-5Q9HDB9 667 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 IL26Q9NPH9 171 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 LZTFL1Q9NQ48 299 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CNGB3Q9NQW8 809 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CYP26B1Q9NR63 512 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 ARMC1Q9NVT9 282 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM120CQ9NX05 1096 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TMOD3Q9NYL9 352 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SAMD15Q9P1V8 674 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 COPG2Q9UBF2 871 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 AFF4Q9UHB7 1163 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SERPINB13Q9UIV8 391 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 DTX4Q9Y2E6 619 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 PPIL1Q9Y3C6 166 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM32AQ9Y421 112 aaKnown RBP4.56□□□□□ -1.68
NIPBL-206ENST00000509429 NFE2L3Q9Y4A8 694 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 USP16Q9Y5T5 823 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 GPR45Q9Y5Y3 372 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 CLCA3PQ9Y6N3 262 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 FAM169AQ9Y6X4 670 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 SPACA6W5XKT8 324 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 TRPM2O94759 1503 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 PLB1Q6P1J6 1458 aa4.56□□□□□ -1.68
NIPBL-206ENST00000509429 PPIP5K1Q6PFW1 1433 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 SCAPERQ9BY12 1400 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 MYOM1P52179 1685 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 PHLPP2Q6ZVD8 1323 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 DEPDC5O75140 1603 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1B0GTQ1 180 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 hCG_1809904A0A1W2PP81 198 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1W2PPE2 198 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1W2PR64 198 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1W2PRV1 198 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 TMEM120BA0PK00 339 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms