RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 FBXW10Q5XX13 1052 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 DPY19L2P1Q6NXN4 242 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 KYAT3Q6YP21 454 aaKnown RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 RNF111Q6ZNA4 994 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 DPY19L3Q6ZPD9 716 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 PTAR1Q7Z6K3 402 aaPredicted RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 SPATS2Q86XZ4 545 aaKnown RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ZNF354CQ86Y25 554 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 SPPL2CQ8IUH8 684 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 RYBPQ8N488 228 aaPredicted RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ZNF655Q8N720 491 aaPredicted RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 EMC1Q8N766 993 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 BHLHE22Q8NFJ8 381 aaPredicted RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 OR7D4Q8NG98 312 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 MDM1Q8TC05 714 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 FAM172AQ8WUF8 416 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 RXFP2Q8WXD0 754 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 CASKIN2Q8WXE0 1202 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 NTAN1Q96AB6 310 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 FEM1CQ96JP0 617 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 MYOCQ99972 504 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 C1QTNF7Q9BXJ2 289 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 NAT10Q9H0A0 1025 aaKnown RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 MAGEH1Q9H213 219 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ZDHHC6Q9H6R6 413 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 USP29Q9HBJ7 922 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 NLRC4Q9NPP4 1024 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 SEPT11Q9NVA2 429 aaKnown RBP7.54□□□□□ -1.2
CCSER1-208ENST00000509109 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 TMEM248Q9NWD8 314 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ADAM22Q9P0K1 906 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 ZNF212Q9UDV6 495 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 SNX10Q9Y5X0 201 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 KNTC1P50748 2209 aa7.54□□□□□ -1.2
CCSER1-208ENST00000509109 DOCK9Q9BZ29 2069 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 FAM149AA5PLN7 773 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 FPGTO14772 594 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SMAD6O43541 496 aaKnown RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 TSPAN6O43657 245 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SIGLEC6O43699 453 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SDC3O75056 442 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ZMPSTE24O75844 475 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 IGSF6O95976 241 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 GSRP00390 522 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 PLEKP08567 350 aaPredicted RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 TMEM253P0C7T8 217 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CDK11BP21127 795 aaKnown RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 GPD1P21695 349 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 GLDCP23378 1020 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ACP1P24666 158 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 L1CAMP32004 1257 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 HTR7P34969 479 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CCNFP41002 786 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 RABIFP47224 123 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 HNRNPKP61978 463 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 E2F1Q01094 437 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 UBXN1Q04323 297 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CHRNEQ04844 493 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 RAD51Q06609 339 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 DNAJC3Q13217 504 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SGCGQ13326 291 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 NR0B2Q15466 257 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 C15orf59Q2T9L4 293 aaPredicted RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 BBS9Q3SYG4 887 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 PARP15Q460N3 678 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CCDC14Q49A88 953 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 HES3Q5TGS1 186 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 MANEALQ5VSG8 457 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 TRNP1Q6NT89 227 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 DNAJC24Q6P3W2 148 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 RBM43Q6ZSC3 357 aaKnown RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ABI3BPQ7Z7G0 1075 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 PARGQ86W56 976 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 PHF13Q86YI8 300 aaPredicted RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CHST14Q8NCH0 376 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 DENND6BQ8NEG7 585 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 OR2AP1Q8NGE2 309 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 OR4C6Q8NH72 309 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SLC30A5Q8TAD4 765 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SLC20A1Q8WUM9 679 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ARHGEF2Q92974 986 aaKnown RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ARRDC3Q96B67 414 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 GDAP1L1Q96MZ0 367 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SLC17A9Q9BYT1 436 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 TM6SF2Q9BZW4 377 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 CATSPERBQ9H7T0 1116 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 NLGN3Q9NZ94 848 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 HECAQ9UBI9 543 aaPredicted RBP7.53□□□□□ -1.2
CCSER1-208ENST00000509109 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 SIK3Q9Y2K2 1263 aa7.53□□□□□ -1.2
CCSER1-208ENST00000509109 ZNF281Q9Y2X9 895 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms