RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FGFR4P22455 802 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CCND3P30281 292 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SLC16A2P36021 539 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 JAM2P57087 298 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SLC25A3Q00325 362 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PKN2Q16513 984 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DUOXA2Q1HG44 320 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ENPP7Q6UWV6 458 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF573Q86YE8 665 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HUS1BQ8NHY5 278 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 KIFAP3Q92845 792 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 MSI2Q96DH6 328 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 BPIFA3Q9BQP9 254 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GRIP2Q9C0E4 1043 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C8orf4Q9NR00 106 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PXMP2Q9NR77 195 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DONSONQ9NYP3 566 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 LNPEPQ9UIQ6 1025 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJC16Q9Y2G8 782 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ENTPD2Q9Y5L3 495 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PHIPQ8WWQ0 1821 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TBKBP1A7MCY6 615 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RAD51BO15315 384 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GSTA1P08263 222 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 COX7A2P14406 83 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HOXB8P17481 243 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GLRA2P23416 452 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 KCNJ1P48048 391 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RAD23BP54727 409 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 F2RL1P55085 397 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RAB14P61106 215 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HSDL1Q3SXM5 330 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ADGRA1Q86SQ6 560 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HERC6Q8IVU3 1022 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C11orf44Q8N8P7 122 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 NLGN2Q8NFZ4 835 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GIPC3Q8TF64 312 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ELMOD3Q96FG2 381 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C8orf76Q96K31 380 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 MRGPRX4Q96LA9 322 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GORASP1Q9BQQ3 440 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ITPAQ9BY32 194 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 WDR11Q9BZH6 1224 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGAP20Q9P2F6 1191 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC187A0A096LP49 1063 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C22orf46C9J442 243 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 H3BNC9 293 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 K7EPI3 171 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DFFAO00273 331 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TNNC2P02585 160 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DLDP09622 509 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PEPDP12955 493 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PTAFRP25105 342 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RBM34P42696 430 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 FMO5P49326 533 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GDI2P50395 445 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PCBP4P57723 403 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 IRX4P78413 519 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CD83Q01151 205 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 NSUN2Q08J23 767 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 NME3Q13232 169 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TMED2Q15363 201 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ADIPOQQ15848 244 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 NTRK3Q16288 839 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SPANXN2Q5MJ10 180 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DPP8Q6V1X1 898 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SMYD1Q8NB12 490 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 USP38Q8NB14 1042 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 FBXO15Q8NCQ5 510 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TMCO6Q96DC7 493 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GIMAP5Q96F15 307 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TCTN2Q96GX1 697 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ZDHHC3Q9NYG2 299 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 OGFRQ9NZT2 677 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RGS17Q9UGC6 210 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 POLLQ9UGP5 575 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SARDHQ9UL12 918 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HPSEQ9Y251 543 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SCN9AQ15858 1988 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 OR6C74A6NCV1 312 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 A8MU76 341 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 LAD1O00515 517 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 RGS13O14921 159 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 BCAT2O15382 392 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-209ENST00000508871 YKT6O15498 198 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 TRIM13O60858 407 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 MMP1P03956 469 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 IL1R2P27930 398 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ALDH3A1P30838 453 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 ADCY8P40145 1251 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 PIK3CGP48736 1102 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 STARP49675 285 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 GSDMDP57764 484 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 CCNA1P78396 465 aa3.92□□□□□ -1.78
NEDD4-209ENST00000508871 SORDQ00796 357 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms