RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TMEM110-MUSTN1A8MSY1 372 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 NEDD8-MDP1E9PL57 170 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 SPECC1L-ADORA2AF8WAN1 911 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 H0Y626 953 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 I6L893 689 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 KIF2AO00139 706 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 EEF2KO00418 725 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 NCAM2O15394 837 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 DAPK3O43293 454 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TBL1XO60907 577 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ULK1O75385 1050 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PALMO75781 387 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 LUC7L3O95232 432 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 APODP05090 189 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ARSAP15289 507 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 DRD1P21728 446 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 KDELR1P24390 212 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 IL1R2P27930 398 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 EPHB2P29323 1055 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 OR1E1P30953 314 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC6A4P31645 630 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PTPN7P35236 360 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAGEA9P43362 315 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TNFRSF4P43489 277 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ID4P47928 161 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PEX5P50542 639 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ARSEP51690 589 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 NDST2P52849 883 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 CDH6P55285 790 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 RWDD2BP57060 319 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 YBEYP58557 167 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TPI1P60174 286 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZXDAP98168 799 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 SULT2A1Q06520 285 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC20A2Q08357 652 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 GRSF1Q12849 480 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF177Q13360 481 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 CDH18Q13634 790 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TFDP2Q14188 446 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MLF2Q15773 248 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ANO4Q32M45 955 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TFDP3Q5H9I0 405 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 DGKKQ5KSL6 1271 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PRR31Q5SQ13 230 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZFYVE27Q5T4F4 411 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRIM68Q6AZZ1 485 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 GRAMD4Q6IC98 578 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 RWDD4Q6NW29 188 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF852Q6ZMS4 543 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TPGS1Q6ZTW0 290 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 RFX8Q6ZV50 586 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 CYP4V2Q6ZWL3 525 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ANKS1BQ7Z6G8 1248 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 C11orf74Q86VG3 221 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TMEM25Q86YD3 366 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MFN1Q8IWA4 741 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRIM48Q8IWZ4 208 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 UMODL1-AS1Q8N2C9 162 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 RTL3Q8N8U3 475 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 KDM1BQ8NB78 822 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 UCMAQ8WVF2 138 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 FAM3CQ92520 227 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 DLG3Q92796 817 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 EDAQ92838 391 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 WBP2Q969T9 261 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 FAF2Q96CS3 445 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 HES6Q96HZ4 224 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZFYVE19Q96K21 471 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PEBP4Q96S96 227 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PNKPQ96T60 521 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 P2RY13Q9BPV8 354 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAGEH1Q9H213 219 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ANLNQ9NQW6 1124 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ARHGEF3Q9NR81 526 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 GTSE1Q9NYZ3 720 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 XPO7Q9UIA9 1087 aaKnown RBP5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 JRKLQ9Y4A0 524 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 SPO11Q9Y5K1 396 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATP23Q9Y6H3 246 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 PIAS3Q9Y6X2 628 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 TECTAO75443 2155 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 COL4A2P08572 1712 aa5.6□□□□□ -1.51
HMGB1P44-201ENST00000508597 GOLGA6L7A0A1B0GV03 622 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRD1A4D1F6 860 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 SH3D21A4FU49 640 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 OTOL1A6NHN0 477 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 PI4K2BG5E9Z4 385 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 K7ESF4 209 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CES2O00748 559 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 NARSO43776 548 aaKnown RBP5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 CREB3O43889 395 aa5.59□□□□□ -1.51
HMGB1P44-201ENST00000508597 TSPAN3O60637 253 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms