RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GALNT2Q10471 571 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 PPP2R5BQ15173 497 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 KIF26BQ2KJY2 2108 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 C2orf68Q2NKX9 166 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 LCTLQ6UWM7 567 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 DSELQ8IZU8 1212 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 ZCCHC9Q8N567 271 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 ZBTB2Q8N680 514 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 LMNTD1Q8N9Z9 388 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 FEM1CQ96JP0 617 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 KLHL15Q96M94 604 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 MPHOSPH8Q99549 860 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 TKTL2Q9H0I9 626 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 PCDH9Q9HC56 1237 aa5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 FBXO9Q9UK97 447 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-206ENST00000508524 LDLRAD4O15165 306 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 COX7A2P14406 83 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 MCM3P25205 808 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 RAD23BP54727 409 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 RELQ04864 619 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 SLC20A2Q08357 652 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 CAMK1Q14012 370 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 CTF1Q16619 201 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 TAOK1Q7L7X3 1001 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 RRM2BQ7LG56 351 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 TMPRSS12Q86WS5 348 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 DCUN1D3Q8IWE4 304 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 ODF3L1Q8IXM7 274 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 HUS1BQ8NHY5 278 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 PPM1EQ8WY54 764 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 APOPT1Q96IL0 206 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 TTC14Q96N46 770 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 MCM9Q9NXL9 1143 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 RRN3Q9NYV6 651 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 LUZP4Q9P127 313 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 TBX20Q9UMR3 447 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 BIVM-ERCC5R4GMW8 1640 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 YEATS2Q9ULM3 1422 aa5.21□□□□□ -1.58
TOPBP1-206ENST00000508524 PRSS47A8MTI9 375 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 HLA-DOBP13765 273 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 TRPC3Q13507 836 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 RBBP5Q15291 538 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 PRICKLE4Q2TBC4 344 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 SLC9B1Q4ZJI4 515 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 GFRALQ6UXV0 394 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 SLC36A4Q6YBV0 504 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 KRBA2Q6ZNG9 492 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 QSOX2Q6ZRP7 698 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 OR2AK2Q8NG84 335 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 PABPC5Q96DU9 382 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 CSTL1Q9H114 145 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 MMP28Q9H239 520 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 MMP25Q9NPA2 562 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 KLHL1Q9NR64 748 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 PPP1R14DQ9NXH3 145 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 SAGE1Q9NXZ1 904 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 A4GNTQ9UNA3 340 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 ZNF711Q9Y462 761 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 SCINQ9Y6U3 715 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 CFAP43Q8NDM7 1665 aa5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 PDS5AQ29RF7 1337 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 ARID4BQ4LE39 1312 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-206ENST00000508524 A0A1W2PQM1 296 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 PRR23AA6NEV1 266 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 HOXC11O43248 304 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 GAS8-AS1O95177 125 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 IRF1P10914 325 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 DDIT3P35638 169 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 METAP2P50579 478 aaKnown RBP eCLIP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 CLCNKAP51800 687 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 HNRNPH2P55795 449 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 DHX8Q14562 1220 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 GPR68Q15743 365 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 PLEKHA7Q6IQ23 1121 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 GDPD4Q6W3E5 623 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 TMEM219Q86XT9 240 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 CIARTQ8N365 385 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 USP13Q92995 863 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 UHRF2Q96PU4 802 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 H2AFJQ9BTM1 129 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 PPP1R3EQ9H7J1 279 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 MPP6Q9NZW5 540 aa5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 ERRFI1Q9UJM3 462 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-206ENST00000508524 ARHGEF40Q8TER5 1519 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 NCAM2O15394 837 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 SEC14L5O43304 696 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 DDX5P17844 614 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 S1PR1P21453 382 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 HSPA1LP34931 641 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 GABRB2P47870 512 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 BIRC3Q13489 604 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 BAK1Q16611 211 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 SYT16Q17RD7 645 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 SLC45A4Q5BKX6 768 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 KCNT1Q5JUK3 1230 aa5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 OTUD3Q5T2D3 398 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-206ENST00000508524 WDR63Q8IWG1 891 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms