RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 FNBP1LQ5T0N5 605 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 CERCAMQ5T4B2 595 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 EMBQ6PCB8 327 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 KIAA1324Q6UXG2 1013 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 LYSMD3Q7Z3D4 306 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 GLT6D1Q7Z4J2 308 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 HORMAD1Q86X24 394 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 AGGF1Q8N302 714 aaeCLIP8.63□□□□□ -1.03
USP46-207ENST00000508499 TAB3Q8N5C8 712 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 DENND6BQ8NEG7 585 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PPHLN1Q8NEY8 458 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 ZC3H10Q96K80 434 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 SPACA7Q96KW9 195 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TTC25Q96NG3 672 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 DUSP15Q9H1R2 295 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 SLC6A17Q9H1V8 727 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 KCNH6Q9H252 994 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SAMD15Q9P1V8 674 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP46-207ENST00000508499 APPL1Q9UKG1 709 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 DMTF1Q9Y222 760 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PCDHGA2Q9Y5H1 932 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 LRP4O75096 1905 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ZCWPW2A0A1B0GU75 182 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 CCDC151A5D8V7 595 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 F5H423 210 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 GOLGA8MH3BSY2 632 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 LILRB5O75023 590 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 AVILO75366 819 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TM7SF2O76062 418 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 CLDN7O95471 211 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SEMA4FO95754 770 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 C1SP09871 688 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ALPIP09923 528 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PGAM1P18669 254 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PAMP19021 973 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 MGAT1P26572 445 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ACSL1P33121 698 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 LIG3P49916 1009 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PRSS12P56730 875 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 VSNL1P62760 191 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 FAM193AP78312 1265 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 ILF2Q12905 390 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 HLTFQ14527 1009 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP46-207ENST00000508499 POU6F1Q14863 301 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ZNF284Q2VY69 593 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TMEM31Q5JXX7 168 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SPANXN3Q5MJ09 141 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SYCP2LQ5T4T6 812 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TSTD2Q5T7W7 516 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 HENMT1Q5T8I9 393 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 KIAA0930Q6ICG6 404 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 ESRP1Q6NXG1 681 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 KDELC2Q7Z4H8 507 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 GALNT7Q86SF2 657 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SLC25A41Q8N5S1 370 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 OR13J1Q8NGT2 312 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 OR14C36Q8NHC7 312 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 BLOC1S5Q8TDH9 187 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 AENQ8WTP8 325 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 GAB3Q8WWW8 586 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 FOXJ1Q92949 421 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 CAVIN3Q969G5 261 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 STAMBPL1Q96FJ0 436 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 DTD2Q96FN9 168 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TOE1Q96GM8 510 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 VPS35Q96QK1 796 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 APOL2Q9BQE5 337 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 WDR83Q9BRX9 315 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 C1QTNF7Q9BXJ2 289 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PARD6BQ9BYG5 372 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 GPR63Q9BZJ6 419 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 POLR3BQ9NW08 1133 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 SMOXQ9NWM0 555 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ZSCAN32Q9NX65 697 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SYBUQ9NX95 663 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PKD2L2Q9NZM6 624 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 NFU1Q9UMS0 254 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 PKP3Q9Y446 797 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TRBV5-4A0A0C4DH59 114 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 METTL12A8MUP2 240 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 WNT9AO14904 365 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 AURKAO14965 403 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 ABHD2P08910 425 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 HOXC4P09017 264 aaPredicted RBP8.62□□□□□ -1.03
USP46-207ENST00000508499 MYBL2P10244 700 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 C6P13671 934 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 CTPS1P17812 591 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 TRIM23P36406 574 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 ELK3P41970 407 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 MAGEA4P43358 317 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 ARCN1P48444 511 aaKnown RBP8.62□□□□□ -1.03
USP46-207ENST00000508499 SESN2P58004 480 aaPredicted RBP8.62□□□□□ -1.03
USP46-207ENST00000508499 XIAPP98170 497 aa8.62□□□□□ -1.03
USP46-207ENST00000508499 PDIA2Q13087 525 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms