RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LINGO4Q6UY18 593 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GDPD4Q6W3E5 623 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 C1orf186Q6ZWK4 172 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 P4HA3Q7Z4N8 544 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF605Q86T29 641 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SYT12Q8IV01 421 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ARL10Q8N8L6 244 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SMRP1Q8NCR6 262 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM161BQ8NDZ6 487 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 BTN2A3PQ96KV6 586 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM237Q96Q45 408 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MYLK2Q9H1R3 596 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 KCNN2Q9H2S1 579 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PDE7BQ9NP56 450 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TRPC4Q9UBN4 977 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 STON1Q9Y6Q2 735 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SMCHD1A6NHR9 2005 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 A0A0A6YYK5 440 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1B0GTW7 788 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CAPN8A6NHC0 703 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HAS3O00219 553 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PGRMC1O00264 195 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HIST1H2ABP04908 130 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MMEP08473 750 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PLEKP08567 350 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TAS2R50P59544 299 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RPP38P78345 283 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 POU4F1Q01851 419 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZP2Q05996 745 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ZNHIT3Q15649 155 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CNGA2Q16280 664 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC16AQ2KHT3 1053 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC73Q5JTD7 316 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LY6G5CQ5SRR4 150 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LYPLAL1Q5VWZ2 237 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HIST3H2AQ7L7L0 130 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PEX5LQ8IYB4 626 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MINDY1Q8N5J2 469 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC185Q8N715 623 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PPM1NQ8N819 430 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 IRGQQ8WZA9 623 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HIST1H2ACQ93077 130 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ATXN7L3BQ96GX2 97 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CELF6Q96J87 481 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LMLNQ96KR4 655 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CYP2S1Q96SQ9 504 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PHOX2BQ99453 314 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HEMGNQ9BXL5 484 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FAM126AQ9BYI3 521 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RBCK1Q9BYM8 510 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 BCL2L14Q9BZR8 327 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 XPO4Q9C0E2 1151 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CARD9Q9H257 536 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RHBGQ9H310 441 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NDST4Q9H3R1 872 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ANLNQ9NQW6 1124 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC39A1Q9NY26 324 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SCOCQ9UIL1 159 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RBM7Q9Y580 266 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GNG14A0A1W2PPG7 69 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 E9PAM4 449 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FSCN2O14926 492 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MID1O15344 667 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DFNA5O60443 496 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 IPO13O94829 963 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 STAU1O95793 577 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 POLBP06746 335 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ITGB6P18564 788 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 C5AR1P21730 350 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 CDH3P22223 829 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ITPKAP23677 461 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DNAJB1P25685 340 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 OTX2P32243 289 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 IGFALSP35858 605 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NUP62P37198 522 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MMP13P45452 471 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ALDH9A1P49189 494 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PCBP4P57723 403 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NUP107P57740 925 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 COPZ1P61923 177 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GJB7Q6PEY0 223 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC30A9Q6PML9 568 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RBM44Q6ZP01 1051 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 NLRP9Q7RTR0 991 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FAM98AQ8NCA5 519 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MOSPD2Q8NHP6 518 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RFWD2Q8NHY2 731 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SH3GL3Q99963 347 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ILKAPQ9H0C8 392 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ABCB6Q9NP58 842 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 INTS9Q9NV88 658 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RNF14Q9UBS8 474 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MRPS33Q9Y291 106 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SIK3Q9Y2K2 1263 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 GVINP1Q7Z2Y8 2422 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TRIP11Q15643 1979 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FAM221BA6H8Z2 402 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TISP43B9A030 160 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PAGE1O75459 146 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms