RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 LGR4Q9BXB1 951 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 GOLPH3LQ9H4A5 285 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 CARS2Q9HA77 564 aaKnown RBP9.13□□□□□ -0.95
CAST-220ENST00000508117 TMEM9Q9P0T7 183 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 LHX3Q9UBR4 397 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 TMEM59LQ9UK28 342 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 SRPK3Q9UPE1 567 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAST-220ENST00000508117 RPS6KL1Q9Y6S9 549 aa9.13□□□□□ -0.95
CAST-220ENST00000508117 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 A1L4Q6 167 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 SORBS2O94875 1100 aaKnown RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 LRIG2O94898 1065 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 SMC2O95347 1197 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 PIGNO95427 931 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 GM2AP17900 193 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 F8A1P23610 371 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 TEAD1P28347 426 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 ERCC5P28715 1186 aaPredicted RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 USP8P40818 1118 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 CSNK1DP48730 415 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 PKP1Q13835 747 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 ATP1A1-AS1Q5TC04 95 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 TRNP1Q6NT89 227 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 RWDD4Q6NW29 188 aaKnown RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 ZSWIM9Q86XI8 627 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 SLC34A3Q8N130 599 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 OR10G6Q8NH81 332 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 ECHDC3Q96DC8 303 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 TBC1D31Q96DN5 1066 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 CFAP57Q96MR6 1250 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 NCAPGQ9BPX3 1015 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 TEX101Q9BY14 249 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 FRMD8Q9BZ67 464 aaPredicted RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 SCAND2PQ9GZW5 306 aaPredicted RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 MLXIPLQ9NP71 852 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 PHPT1Q9NRX4 125 aaPredicted RBP9.12□□□□□ -0.95
CAST-220ENST00000508117 APEX2Q9UBZ4 518 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 KCND3Q9UK17 655 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 PCDHGA6Q9Y5G7 932 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 F8P00451 2351 aa9.12□□□□□ -0.95
CAST-220ENST00000508117 BICDL2A1A5D9 508 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 POLR1CO15160 346 aaPredicted RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 INPP4BO15327 924 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 BUB1BO60566 1050 aaPredicted RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 CLDN1O95832 211 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 LDLRP01130 860 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 FUCA1P04066 466 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 PDGFAP04085 211 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 IVLP07476 585 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 MPSTP25325 297 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 AK4P27144 223 aaPredicted RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 BPIFB4P59827 614 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 POLR2LP62875 67 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 CTBSQ01459 385 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 GUCA2AQ02747 115 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SEMA5AQ13591 1074 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 CYTH1Q15438 398 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 PARP15Q460N3 678 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 C1QL3Q5VWW1 255 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 PAPD7Q5XG87 772 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 GJB7Q6PEY0 223 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SLC30A9Q6PML9 568 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 PATE1Q8WXA2 126 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SEC14L1Q92503 715 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SMARCE1Q969G3 411 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SCARF2Q96GP6 870 aaPredicted RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 AHCYL2Q96HN2 611 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 CTRCQ99895 268 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SUFUQ9UMX1 484 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 SLC17A4Q9Y2C5 497 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 PCDHGA9Q9Y5G4 932 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 ST14Q9Y5Y6 855 aa9.11□□□□□ -0.95
CAST-220ENST00000508117 MRPS18BQ9Y676 258 aaKnown RBP9.11□□□□□ -0.95
CAST-220ENST00000508117 TNRC6AQ8NDV7 1962 aaKnown RBP9.1□□□□□ -0.95
CAST-220ENST00000508117 GTPBP10A4D1E9 387 aaKnown RBP9.1□□□□□ -0.95
CAST-220ENST00000508117 GOLGA6L3A6NEY3 463 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 WASH4PA8MWX3 477 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 FAM72CH0Y354 149 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 PLEKP08567 350 aaPredicted RBP9.1□□□□□ -0.95
CAST-220ENST00000508117 FURINP09958 794 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 ANKRD34CP0C6C1 535 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 COL8A1P27658 744 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 SERPINA4P29622 427 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 DLSTP36957 453 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 ADCY8P40145 1251 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 GNPDA1P46926 289 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 EPHA4P54764 986 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 CDK3Q00526 305 aa9.1□□□□□ -0.95
CAST-220ENST00000508117 ERV3-1Q14264 604 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms