RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PTSQ03393 145 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 BNIP3Q12983 259 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 EIF2B5Q13144 721 aaKnown RBP16.66■□□□□ 0.26
SNCA-209ENST00000506244 TPRG1LQ5T0D9 272 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 KDELC1Q6UW63 502 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 ARHGEF18Q6ZSZ5 1173 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 KANSL1Q7Z3B3 1105 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 KDELC2Q7Z4H8 507 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 TECPR1Q7Z6L1 1165 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 PLA2G15Q8NCC3 412 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 ZNF548Q8NEK5 533 aaPredicted RBP16.66■□□□□ 0.26
SNCA-209ENST00000506244 IPMKQ8NFU5 416 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 SLC35B2Q8TB61 432 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 AP2M1Q96CW1 435 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 DUSP23Q9BVJ7 150 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 KCNF1Q9H3M0 494 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 ZFYVE1Q9HBF4 777 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 EVA1BQ9NVM1 165 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 NLGN3Q9NZ94 848 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 HACD3Q9P035 362 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 ZKSCAN5Q9Y2L8 839 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 CSNK1G3Q9Y6M4 447 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 SPAARA0A1B0GVQ0 90 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 C5orf60A6NFR6 353 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 GOLGA8CPA6NN73 597 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 AQP9O43315 295 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 KIF5CO60282 957 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 RASGRP1O95267 797 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 CLDN7O95471 211 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 FGF1P05230 155 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 GPR1P46091 355 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 P3H1Q32P28 736 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 ZNF542PQ5EBM4 170 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
SNCA-209ENST00000506244 FAXCQ5TGI0 409 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 ENPP7Q6UWV6 458 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 KDM7AQ6ZMT4 941 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 HEATR4Q86WZ0 1026 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 FSTL5Q8N475 847 aaPredicted RBP16.65■□□□□ 0.26
SNCA-209ENST00000506244 EID2Q8N6I1 236 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 OR56A4Q8NGH8 313 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 OR4C6Q8NH72 309 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
SNCA-209ENST00000506244 OXNAD1Q96HP4 312 aaPredicted RBP16.65■□□□□ 0.26
SNCA-209ENST00000506244 CNDP2Q96KP4 475 aaKnown RBP16.65■□□□□ 0.26
SNCA-209ENST00000506244 MRGPRX2Q96LB1 330 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 TLR10Q9BXR5 811 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 GPR63Q9BZJ6 419 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 C10orf88Q9H8K7 445 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
SNCA-209ENST00000506244 LOC285095A0A1B0GVY8 99 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 TCRBV7S2A1N4TA0A589 114 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 F5H423 210 aaPredicted RBP16.64■□□□□ 0.25
SNCA-209ENST00000506244 SCAMP1O15126 338 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 LDOC1O95751 146 aaPredicted RBP16.64■□□□□ 0.25
SNCA-209ENST00000506244 PSMB4P28070 264 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 ACTN2P35609 894 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SPINT3P49223 89 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 HK3P52790 923 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SRP54P61011 504 aaKnown RBP16.64■□□□□ 0.25
SNCA-209ENST00000506244 CDK3Q00526 305 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 PTPRRQ15256 657 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 ELOCQ15369 112 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SLC1A5Q15758 541 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 ADAMTSL4Q6UY14 1074 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 HID1Q8IV36 788 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SDR16C5Q8N3Y7 309 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 FAM71DQ8N9W8 422 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SMIM14Q96QK8 99 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 TEX101Q9BY14 249 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 ABCG8Q9H221 673 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 NCKIPSDQ9NZQ3 722 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 CD84Q9UIB8 345 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 R3HDM2Q9Y2K5 976 aaKnown RBP16.64■□□□□ 0.25
SNCA-209ENST00000506244 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 PCNX2A6NKB5 2137 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 SPTBN2O15020 2390 aa16.64■□□□□ 0.25
SNCA-209ENST00000506244 MED19A0JLT2 244 aaPredicted RBP16.63■□□□□ 0.25
SNCA-209ENST00000506244 K7ESM1 405 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 ENC1O14682 589 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 FFAR2O15552 330 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 LIASO43766 372 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 GCATO75600 419 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 SLC4A1P02730 911 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 ATXN1LP0C7T5 689 aaKnown RBP16.63■□□□□ 0.25
SNCA-209ENST00000506244 FTH1P19P0C7X4 201 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 CTSEP14091 401 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 STIP1P31948 543 aaKnown RBP16.63■□□□□ 0.25
SNCA-209ENST00000506244 DCDC1P59894 354 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 CCDC173Q0VFZ6 552 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 CDKN3Q16667 212 aa16.63■□□□□ 0.25
SNCA-209ENST00000506244 ALG11Q2TAA5 492 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms