RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM96BQ9Y3D0 163 aa5.93□□□□□ -1.46
NIPBL-203ENST00000503274 PAM16Q9Y3D7 125 aa5.93□□□□□ -1.46
NIPBL-203ENST00000503274 ABCA3Q99758 1704 aa5.93□□□□□ -1.46
NIPBL-203ENST00000503274 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 CLEC18AA5D8T8 446 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TAF4O00268 1085 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TIMM23O14925 209 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TNFSF14O43557 240 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 VNN2O95498 520 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 MT-CYBP00156 380 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TFP02787 698 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 C21orf33P30042 268 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 ELF1P32519 619 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 RPL3P39023 403 aaKnown RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 POU5F1BQ06416 359 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 LTBQ06643 244 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 NEXNQ0ZGT2 675 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 FOXD4Q12950 439 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 GRIK3Q13003 919 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 ERV3-1Q14264 604 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TYW3Q6IPR3 259 aaKnown RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 KLHL24Q6TFL4 600 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 FJX1Q86VR8 437 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 DHX40Q8IX18 779 aaKnown RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 AADATQ8N5Z0 425 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 CLEC18CQ8NCF0 446 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TXNDC15Q96J42 360 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 NR1H4Q96RI1 486 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-203ENST00000503274 SLC25A33Q9BSK2 321 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 SLC26A6Q9BXS9 759 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 NFE2L3Q9Y4A8 694 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 TTC21AQ8NDW8 1320 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 PARD3Q8TEW0 1356 aa5.92□□□□□ -1.46
NIPBL-203ENST00000503274 USP6P35125 1406 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 SSH2Q76I76 1423 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 DYTNA2CJ06 578 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 J3KR12 359 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 LDLRAD4O15165 306 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 SERPINI2O75830 405 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 NDUFB4O95168 129 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 ETFAP13804 333 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 ITGAXP20702 1163 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 EPHA8P29322 1005 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-203ENST00000503274 GABRB2P47870 512 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 CTCFP49711 727 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-203ENST00000503274 PLCB4Q15147 1175 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 EFHC1Q5JVL4 640 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 CCDC129Q6ZRS4 1044 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 TOM1L2Q6ZVM7 507 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 SLC46A3Q7Z3Q1 461 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 NOXA1Q86UR1 476 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 TDRPQ86YL5 185 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 CLIP4Q8N3C7 705 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 ZCCHC9Q8N567 271 aaKnown RBP5.91□□□□□ -1.46
NIPBL-203ENST00000503274 PAF1Q8N7H5 531 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 FAM216AQ8WUB2 273 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 FBXL8Q96CD0 374 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 LRFN5Q96NI6 719 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 GLIS2Q9BZE0 524 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-203ENST00000503274 TAS2R10Q9NYW0 307 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 LSM4Q9Y4Z0 139 aaKnown RBP5.91□□□□□ -1.46
NIPBL-203ENST00000503274 TONSLQ96HA7 1378 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 NRAPQ86VF7 1730 aa5.91□□□□□ -1.46
NIPBL-203ENST00000503274 TTC36A6NLP5 189 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 NPIPB11E5RHQ5 1161 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 BCAT2O15382 392 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 KCNJ13O60928 360 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 AGAP20933 346 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 CHATP28329 748 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 TKTP29401 623 aaKnown RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 KRT9P35527 623 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 CPOXP36551 454 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 PIGAP37287 484 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 GNAQP50148 359 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 EIF3BP55884 814 aaKnown RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 ZXDBP98169 803 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 TCTN1Q2MV58 587 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 NEK10Q6ZWH5 1172 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 SHFQ7M4L6 423 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 SPATA2LQ8IUW3 424 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 RFFLQ8WZ73 363 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 ERGIC1Q969X5 290 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 ZNF570Q96NI8 536 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 USP44Q9H0E7 712 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 UNC45AQ9H3U1 944 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 PLEKHA4Q9H4M7 779 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 BRF2Q9HAW0 419 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 MAGEE1Q9HCI5 957 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 BPIFA1Q9NP55 256 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 TERF2IPQ9NYB0 399 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 CISD1Q9NZ45 108 aaKnown RBP5.9□□□□□ -1.46
NIPBL-203ENST00000503274 SCINQ9Y6U3 715 aa5.9□□□□□ -1.46
NIPBL-203ENST00000503274 TOPAZ1Q8N9V7 1692 aa5.9□□□□□ -1.47
NIPBL-203ENST00000503274 TTC21BQ7Z4L5 1316 aa5.9□□□□□ -1.47
NIPBL-203ENST00000503274 KDM3AQ9Y4C1 1321 aa5.9□□□□□ -1.47
NIPBL-203ENST00000503274 KTN1Q86UP2 1357 aaKnown RBP5.9□□□□□ -1.47
NIPBL-203ENST00000503274 DISP2A7MBM2 1401 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms