RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TSPAN7P41732 249 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 GPR3P46089 330 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 COPB1P53618 953 aaKnown RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 RAB15P59190 212 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 MC2RQ01718 297 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 MC1RQ01726 317 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 BCL2L1Q07817 233 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 ABHD18Q0P651 414 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 GRM3Q14832 879 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 NR1D2Q14995 579 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 CEACAM20Q6UY09 585 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 SLFN11Q7Z7L1 901 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 TMEM135Q86UB9 458 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 C17orf82Q86X59 251 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 CCDC13Q8IYE1 715 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 BMPERQ8N8U9 685 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 TSEN2Q8NCE0 465 aaKnown RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 SLC30A5Q8TAD4 765 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 HCAR2Q8TDS4 363 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 FNIP1Q8TF40 1166 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 PDCD6IPQ8WUM4 868 aaKnown RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 RNF25Q96BH1 459 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 ZNF641Q96N77 438 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 SLC38A3Q99624 504 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 EFHD1Q9BUP0 239 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 ATP13A3Q9H7F0 1226 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 TMEM98Q9Y2Y6 226 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 PCDHB3Q9Y5E6 796 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 RPS6KL1Q9Y6S9 549 aa9.11□□□□□ -0.95
CCDC171-209ENST00000498725 USP9XQ93008 2570 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-209ENST00000498725 CDC14CA4D256 554 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 DNAJB5O75953 348 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 MAP3K6O95382 1288 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 PDGFAP04085 211 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 HOXC4P09017 264 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 HDAC4P56524 1084 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 YBEYP58557 167 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 NOMO3P69849 1222 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 FOXM1Q08050 763 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 NFATC2Q13469 925 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 PTPRRQ15256 657 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 CLPPQ16740 277 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 HSP90AA4PQ58FG1 418 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 RAET1GQ6H3X3 334 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 DPPA4Q7L190 304 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 TRIM74Q86UV6 250 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 FAM114A1Q8IWE2 563 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 OR10G6Q8NH81 332 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 CPT1CQ8TCG5 803 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 SLC20A1Q8WUM9 679 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 ELMO2Q96JJ3 720 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 TIGD1Q96MW7 591 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 TEFMQ96QE5 360 aaKnown RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 FRMD8Q9BZ67 464 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 SPRY4Q9C004 299 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 GPATCH2LQ9NWQ4 482 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 TRNAU1APQ9NX07 287 aaKnown RBP9.1□□□□□ -0.95
CCDC171-209ENST00000498725 B4GALT6Q9UBX8 382 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 TLK1Q9UKI8 766 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 KCTD3Q9Y597 815 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
CCDC171-209ENST00000498725 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 A0A0U1RQS6 177 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 C2CD4BA6NLJ0 364 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 POLR1CO15160 346 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 RFPL1O75677 317 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PALMO75781 387 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 ZNF28P17035 718 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 MAN1A1P33908 653 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 ETV3P41162 512 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 STAT5AP42229 794 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PAPOLAP51003 745 aaKnown RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 SCNN1BP51168 640 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 CNGA3Q16281 694 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 TPD52L1Q16890 204 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 EIF2S3LQ2VIR3 472 aaKnown RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PARP15Q460N3 678 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 TCTN3Q6NUS6 607 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 STRADAQ7RTN6 431 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 SRRM1Q8IYB3 904 aaKnown RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 GALNT6Q8NCL4 622 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 COQ10AQ96MF6 247 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 NSMCE3Q96MG7 304 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 TUBGCP5Q96RT8 1024 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 DPYSL5Q9BPU6 564 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 CINPQ9BW66 212 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-209ENST00000498725 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 TWSG1Q9GZX9 223 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 RETREG1Q9H6L5 497 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 CATSPERBQ9H7T0 1116 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 PDFQ9HBH1 243 aa9.09□□□□□ -0.95
CCDC171-209ENST00000498725 LUZP4Q9P127 313 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms