RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SIK2Q9H0K1 926 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ZBP1Q9H171 429 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 PABPC3Q9H361 631 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 USP29Q9HBJ7 922 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 DTLQ9NZJ0 730 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 MARCH2Q9P0N8 246 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 SHOC2Q9UQ13 582 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 LZTS1Q9Y250 596 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 ATP8A1Q9Y2Q0 1164 aa5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 HBS1LQ9Y450 684 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-208ENST00000498325 CLUHO75153 1309 aa5.4□□□□□ -1.55
HMGXB4-208ENST00000498325 SLC12A8A0AV02 714 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 FAM72CH0Y354 149 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 DCLK1O15075 740 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 CHADO15335 359 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TEX28O15482 410 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ADAM12O43184 909 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TLR5O60602 858 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 SOAT2O75908 522 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 SEC24AO95486 1093 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TOP3BO95985 862 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 MOCS2O96007 188 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 C1RP00736 705 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 LRG1P02750 347 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ZSCAN5DPP0CG00 497 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ETS1P14921 441 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ATF6P18850 670 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 CCNCP24863 283 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 FDFT1P37268 417 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 LMAN1P49257 510 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ARL4CP56559 192 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 BASP1P80723 227 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 GBE1Q04446 702 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 AP1B1Q10567 949 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TWF1Q12792 350 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 SLC10A2Q12908 348 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 DPYSQ14117 519 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 RNASEH2BQ5TBB1 312 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 FAM72AQ5TYM5 149 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 FAM72DQ6L9T8 149 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 RWDD4Q6NW29 188 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 KLHDC10Q6PID8 442 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 C19orf48Q6RUI8 117 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TMEM184AQ6ZMB5 413 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ETV3LQ6ZN32 361 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ARHGEF18Q6ZSZ5 1173 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 CENPUQ71F23 418 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 RTL10Q7L3V2 364 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 DNAJB7Q7Z6W7 309 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 FAM72BQ86X60 149 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 LRRC49Q8IUZ0 686 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 PDIK1LQ8N165 341 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ZCCHC9Q8N567 271 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 USP33Q8TEY7 942 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 EXOC4Q96A65 974 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 AZIN2Q96A70 460 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TTC25Q96NG3 672 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 OLFM3Q96PB7 478 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ZIM3Q96PE6 472 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 KLHL5Q96PQ7 755 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 QKIQ96PU8 341 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 VAT1Q99536 393 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 DDX50Q9BQ39 737 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 TXLNGYQ9BZA5 131 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ROPN1BQ9BZX4 212 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 RETREG1Q9H6L5 497 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 NOL6Q9H6R4 1146 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ROPN1Q9HAT0 212 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ETNK2Q9NVF9 386 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 OSER1Q9NX31 292 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 C11orf21Q9P2W6 132 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 PPARGC1AQ9UBK2 798 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 VTI1BQ9UEU0 232 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 WASF3Q9UPY6 502 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 YIPF1Q9Y548 306 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 HS3ST4Q9Y661 456 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 ITPR1Q14643 2758 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 MYO16Q9Y6X6 1858 aa5.39□□□□□ -1.55
HMGXB4-208ENST00000498325 LAMA5O15230 3695 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 GOLGA6CA6NDK9 693 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 ZNF840PA6NDX5 716 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 E7EVH7 732 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 E9PAM4 449 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 AGPSO00116 658 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 ALOX15BO15296 676 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 GPR42O15529 346 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 PSMD3O43242 534 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 MSI1O43347 362 aaKnown RBP5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 RIPK2O43353 540 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 MFSD11O43934 449 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 OPHN1O60890 802 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 NEBLO76041 1014 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 FGF19O95750 216 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 TTC4O95801 387 aa5.38□□□□□ -1.55
HMGXB4-208ENST00000498325 IVLP07476 585 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms