RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ABCG2Q9UNQ0 655 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SAMD4AQ9UPU9 718 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZNF804BA4D1E1 1349 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CPDO75976 1380 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NCANO14594 1321 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MYBBP1AQ9BQG0 1328 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 A0A096LPE4 126 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 A0A1W2PPZ6 126 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 KIAA1324LA8MWY0 1029 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 FOXN3O00409 490 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CHL1O00533 1208 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NDC80O14777 642 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 UBE2L6O14933 153 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MSH4O15457 936 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PCDHGA12O60330 932 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SEMA7AO75326 666 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MED6O75586 246 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZMPSTE24O75844 475 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BAIAP3O94812 1187 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DDX58O95786 925 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PARP1P09874 1014 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CBR1P16152 277 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ME1P48163 572 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GCLCP48506 637 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PRPS1P60891 318 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ARG2P78540 354 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 EGR3Q06889 387 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ITPK1Q13572 414 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 COL9A3Q14050 684 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 RGS21Q2M5E4 152 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TKFCQ3LXA3 575 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SLC36A3Q495N2 470 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PABPC1LQ4VXU2 614 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 LRRC24Q50LG9 513 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CARD16Q5EG05 197 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GPR157Q5UAW9 335 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ANKS6Q68DC2 871 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PKN3Q6P5Z2 889 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SPESP1Q6UW49 350 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TFAP2EQ6VUC0 442 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZNF767PQ75MW2 155 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PIM3Q86V86 326 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CALHM1Q8IU99 346 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MAP7D3Q8IWC1 876 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FAM177A1Q8N128 213 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 HORMAD2Q8N7B1 307 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BBS10Q8TAM1 723 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NANPQ8TBE9 248 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ACTRT2Q8TDY3 377 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 STARD8Q92502 1023 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FBXO32Q969P5 355 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MTFMTQ96DP5 389 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 LINC00477Q96M19 166 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 C5orf34Q96MH7 638 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SCLT1Q96NL6 688 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TGS1Q96RS0 853 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PKP2Q99959 881 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ABHD14AQ9BUJ0 271 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NLNQ9BYT8 704 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OSBPL7Q9BZF2 842 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CLPBQ9H078 707 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RAB1BQ9H0U4 201 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TTYH1Q9H313 450 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SMYD3Q9H7B4 428 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZNF287Q9HBT7 754 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZCCHC17Q9NP64 241 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SLC7A8Q9UHI5 535 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DDX25Q9UHL0 483 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 FEZ2Q9UHY8 353 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PHF11Q9UIL8 331 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GGT7Q9UJ14 662 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CNOT11Q9UKZ1 510 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 TCF19Q9Y242 345 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 POLR1DQ9Y2S0 133 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ARFGEF2Q9Y6D5 1785 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MUC6Q6W4X9 2439 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MROH7-TTC4A0A0A0MT08 1334 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MROH7Q68CQ1 1323 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FITM1A5D6W6 292 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 WASH4PA8MWX3 477 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PHF1O43189 567 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 NCK2O43639 380 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 AKR1B10O60218 316 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 VAMP4O75379 141 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RAD51DO75771 328 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TGFAP01135 160 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TFRCP02786 760 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PRB2P02812 416 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 POU2F1P14859 743 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DARSP14868 501 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ANPEPP15144 967 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 UBA1P22314 1058 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ENPP1P22413 925 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GSTM2P28161 218 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RFC4P35249 363 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CRATP43155 626 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RFX5P48382 616 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 AARSP49588 968 aaKnown RBP eCLIP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SOX8P57073 446 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms