RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 WEE2P0C1S8 567 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 CORO1AP31146 461 aaKnown RBP3.67□□□□□ -1.82
SMC4-227ENST00000497984 DDIT3P35638 169 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 GRIK3Q13003 919 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 KRT24Q2M2I5 525 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 SGO1Q5FBB7 561 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 PDSS1Q5T2R2 415 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 ANKRD45Q5TZF3 282 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 ASB18Q6ZVZ8 466 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 FAM160B2Q86V87 743 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 SRBD1Q8N5C6 995 aaKnown RBP3.67□□□□□ -1.82
SMC4-227ENST00000497984 FBXL8Q96CD0 374 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 ZNF570Q96NI8 536 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 EGFL8Q99944 293 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 PYGO2Q9BRQ0 406 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 HERPUD2Q9BSE4 406 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 SYT17Q9BSW7 474 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 MROH8Q9H579 483 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 FAF1Q9UNN5 650 aaPredicted RBP3.67□□□□□ -1.82
SMC4-227ENST00000497984 DLGAP4Q9Y2H0 992 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 OR2W1Q9Y3N9 320 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 IFRD1O00458 451 aaPredicted RBP3.66□□□□□ -1.82
SMC4-227ENST00000497984 RXRAP19793 462 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 GNL1P36915 607 aaPredicted RBP3.66□□□□□ -1.82
SMC4-227ENST00000497984 HOXA1P49639 335 aaPredicted RBP3.66□□□□□ -1.82
SMC4-227ENST00000497984 RAD23BP54727 409 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 LMO4P61968 165 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 GNB1P62873 340 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 C2CD5Q86YS7 1000 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 TRIM58Q8NG06 486 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 CEP70Q8NHQ1 597 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 TBC1D20Q96BZ9 403 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 FSD1Q9BTV5 496 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 NUF2Q9BZD4 464 aa3.66□□□□□ -1.82
SMC4-227ENST00000497984 CTAGE9A4FU28 777 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 PEX12O00623 359 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 PCDH7O60245 1069 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 NBNO60934 754 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 WDR1O75083 606 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 CTAGE8P0CG41 777 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 MAOAP21397 527 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 DRG2P55039 364 aaKnown RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 ISL1P61371 349 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 TBL3Q12788 808 aaKnown RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 SIRPB2Q5JXA9 342 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 GPATCH4Q5T3I0 446 aaKnown RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 APLFQ8IW19 511 aaPredicted RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 CTAGE4Q8IX94 777 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 SLC35F3Q8IY50 421 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 BEST2Q8NFU1 509 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 ST6GAL2Q96JF0 529 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 ATOH8Q96SQ7 321 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 SIN3AQ96ST3 1273 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 ASCL2Q99929 193 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 DCTN5Q9BTE1 182 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 POLR3CQ9BUI4 534 aaPredicted RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 MMP25Q9NPA2 562 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 SNTG1Q9NSN8 517 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 ZNF624Q9P2J8 865 aaPredicted RBP3.65□□□□□ -1.83
SMC4-227ENST00000497984 CTNNAL1Q9UBT7 734 aa3.65□□□□□ -1.83
SMC4-227ENST00000497984 VWA3AA6NCI4 1184 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 PEX14O75381 377 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 MMP14P50281 582 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 LUMP51884 338 aaPredicted RBP3.64□□□□□ -1.83
SMC4-227ENST00000497984 PPFIA1Q13136 1202 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 GTF2H2Q13888 395 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 NAA25Q14CX7 972 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 TAF5Q15542 800 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 GTF2H2CQ6P1K8 395 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 SLC27A1Q6PCB7 646 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 LINGO2Q7L985 606 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 TMEM190Q8WZ59 177 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 PCYT2Q99447 389 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 CD180Q99467 661 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 CMKLR1Q99788 373 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 PYM1Q9BRP8 204 aaKnown RBP3.64□□□□□ -1.83
SMC4-227ENST00000497984 KIAA1456Q9P272 454 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.64□□□□□ -1.832e-144■■■■■ 553.7
SMC4-227ENST00000497984 PRSS21Q9Y6M0 314 aa3.64□□□□□ -1.83
SMC4-227ENST00000497984 TMEM202A6NGA9 273 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 SMIM1B2RUZ4 78 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 BCAT2O15382 392 aaPredicted RBP3.63□□□□□ -1.83
SMC4-227ENST00000497984 HSD3B1P14060 373 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 AZU1P20160 251 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 ZNF10P21506 573 aaPredicted RBP3.63□□□□□ -1.83
SMC4-227ENST00000497984 RRM1P23921 792 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 PDE1BQ01064 536 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 GAGE5Q13069 117 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 GAGE6Q13070 117 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 C2orf68Q2NKX9 166 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 MAP3K21Q5TCX8 1036 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 KCTD18Q6PI47 426 aaPredicted RBP3.63□□□□□ -1.83
SMC4-227ENST00000497984 ATF7IPQ6VMQ6 1270 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 BBS12Q6ZW61 710 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 GPAT4Q86UL3 456 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 TMTC1Q8IUR5 882 aa3.63□□□□□ -1.83
SMC4-227ENST00000497984 ANKRD18AQ8IVF6 992 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms