RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 C17orf82Q86X59 251 aaPredicted RBP12.36□□□□□ -0.43
CLDN12-213ENST00000496677 PAF1Q8N7H5 531 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 TC2NQ8N9U0 490 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
CLDN12-213ENST00000496677 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
CLDN12-213ENST00000496677 LGMNQ99538 433 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 CCDC3Q9BQI4 270 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 TDRD1Q9BXT4 1180 aaKnown RBP12.36□□□□□ -0.43
CLDN12-213ENST00000496677 ABCG8Q9H221 673 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 POLR1BQ9H9Y6 1135 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 SIRPGQ9P1W8 387 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 GULP1Q9UBP9 304 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 CHKBQ9Y259 395 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 ST14Q9Y5Y6 855 aa12.36□□□□□ -0.43
CLDN12-213ENST00000496677 A0A1W2PQM1 296 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 PRSS38A1L453 326 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 PDE2AO00408 941 aaPredicted RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 LCA5LO95447 670 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 JCHAINP01591 159 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 TPM1P09493 284 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 HOXB3P14651 431 aaPredicted RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 NFKBIAP25963 317 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ACTN2P35609 894 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 STC1P52823 247 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 RPL26P61254 145 aaKnown RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 SKOR1P84550 965 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CDK3Q00526 305 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ITKQ08881 620 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 LRRC66Q68CR7 880 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ADAMTSL4Q6UY14 1074 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ZNF765Q7L2R6 523 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 RAVER1Q8IY67 606 aaKnown RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CCDC13Q8IYE1 715 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 FAM46DQ8NEK8 389 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 WDR48Q8TAF3 677 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CCDC74AQ96AQ1 378 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ATXN7L3BQ96GX2 97 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CRELD1Q96HD1 420 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 ZNF578Q96N58 590 aaPredicted RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 OLFM3Q96PB7 478 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 WDR24Q96S15 920 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 LYSMD1Q96S90 227 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 CYP4F12Q9HCS2 524 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 PHPT1Q9NRX4 125 aaPredicted RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 APPL1Q9UKG1 709 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 RPL26L1Q9UNX3 145 aaKnown RBP12.35□□□□□ -0.43
CLDN12-213ENST00000496677 DOLKQ9UPQ8 538 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 SLC17A4Q9Y2C5 497 aa12.35□□□□□ -0.43
CLDN12-213ENST00000496677 PMS2P1A4D2B8 440 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CAPN8A6NHC0 703 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 KCNK1O00180 336 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 FGF1P05230 155 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 IVLP07476 585 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 ZNF30P17039 623 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 COMTP21964 271 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 SLC1A1P43005 524 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 POLD2P49005 469 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 GABREP78334 506 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CCL7P80098 99 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 ARHGEF7Q14155 803 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 QPCTQ16769 361 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
CLDN12-213ENST00000496677 FAM182AQ5T1J6 154 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CERCAMQ5T4B2 595 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 TAF8Q7Z7C8 310 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 NRSN1Q8IZ57 195 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CCNYQ8ND76 341 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 SCAMP4Q969E2 229 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 COX14Q96I36 57 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 SLC46A1Q96NT5 459 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 TRIB3Q96RU7 358 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 PRORYQ9H606 182 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 SPATS2LQ9NUQ6 558 aaKnown RBP12.34□□□□□ -0.43
CLDN12-213ENST00000496677 TRNAU1APQ9NX07 287 aaKnown RBP12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CNOT6Q9ULM6 557 aaKnown RBP12.34□□□□□ -0.43
CLDN12-213ENST00000496677 HYOU1Q9Y4L1 999 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 ARHGEF17Q96PE2 2063 aaPredicted RBP12.34□□□□□ -0.43
CLDN12-213ENST00000496677 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
CLDN12-213ENST00000496677 CLDN7O95471 211 aa12.33□□□□□ -0.44
CLDN12-213ENST00000496677 KRT10P13645 584 aa12.33□□□□□ -0.44
CLDN12-213ENST00000496677 PNLIPP16233 465 aa12.33□□□□□ -0.44
CLDN12-213ENST00000496677 GLB1P16278 677 aa12.33□□□□□ -0.44
CLDN12-213ENST00000496677 CD86P42081 329 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms