RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	FHOD1	Q9Y613	1164 aa		7.85	□□□□□ -1.15
NVL-223	ENST00000496393	MRPS18B	Q9Y676	258 aa	Known RBP	7.85	□□□□□ -1.15
NVL-223	ENST00000496393	CREBBP	Q92793	2442 aa		7.85	□□□□□ -1.15
NVL-223	ENST00000496393	TRBV23OR9-2	A0A075B6M9	112 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	IGHV1OR21-1	A0A087WYE8	117 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	CXorf51A	A0A1B0GTR3	108 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393		J3KR12	359 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	PPM1D	O15297	605 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	SIAH2	O43255	324 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	CREB3	O43889	395 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	FGFR1OP	O95684	399 aa	Known RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	FUCA1	P04066	466 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	RNF224	P0DH78	156 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	GNLY	P22749	145 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	LOR	P23490	312 aa	Predicted RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	POLD2	P49005	469 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	HDAC4	P56524	1084 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	BPIFB4	P59827	614 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	NOMO3	P69849	1222 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	ILF3	Q12906	894 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	AGER	Q15109	404 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	INO80D	Q53TQ3	878 aa	Predicted RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	DCAF12	Q5T6F0	453 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	BRAT1	Q6PJG6	821 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	LIPI	Q6XZB0	460 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	TIPARP	Q7Z3E1	657 aa	Known RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	KDELC2	Q7Z4H8	507 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	HEATR4	Q86WZ0	1026 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	DNAAF5	Q86Y56	855 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	NLGN4X	Q8N0W4	816 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	NAGS	Q8N159	534 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	OR4D9	Q8NGE8	314 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	FNIP1	Q8TF40	1166 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	APOBEC4	Q8WW27	367 aa	Known RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	CASKIN2	Q8WXE0	1202 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	RTP4	Q96DX8	246 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	CELF6	Q96J87	481 aa	Known RBP	7.84	□□□□□ -1.15
NVL-223	ENST00000496393	B3GNT4	Q9C0J1	378 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	APMAP	Q9HDC9	416 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	KCNK4	Q9NYG8	393 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	PILRA	Q9UKJ1	303 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	SUFU	Q9UMX1	484 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	PLEKHM1	Q9Y4G2	1056 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	ST14	Q9Y5Y6	855 aa		7.84	□□□□□ -1.15
NVL-223	ENST00000496393	GTPBP10	A4D1E9	387 aa	Known RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	C2CD4B	A6NLJ0	364 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393		B4E171	279 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TNFRSF10C	O14798	259 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	STK17B	O94768	372 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	LSM8	O95777	96 aa	Known RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	MYCLP1	P12525	358 aa	Predicted RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TCN2	P20062	427 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	SERPINA4	P29622	427 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	GMPR	P36959	345 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TSPAN7	P41732	249 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	ACTR1B	P42025	376 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	STAT1	P42224	750 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	MAPK9	P45984	424 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	RAB15	P59190	212 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	ACTR1A	P61163	376 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	CTBS	Q01459	385 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	KLRB1	Q12918	225 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TRA2A	Q13595	282 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	SEPT6	Q14141	434 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	NR1D2	Q14995	579 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	HSP90AA4P	Q58FG1	418 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	PNCK	Q6P2M8	343 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	SCYL2	Q6P3W7	929 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	DPPA4	Q7L190	304 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TRIM46	Q7Z4K8	759 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	SRL	Q86TD4	932 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TRIM74	Q86UV6	250 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	C17orf82	Q86X59	251 aa	Predicted RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	BMPER	Q8N8U9	685 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TEX19	Q8NA77	164 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	TSEN2	Q8NCE0	465 aa	Known RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	SLC30A5	Q8TAD4	765 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	NUS1	Q96E22	293 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	AHCYL2	Q96HN2	611 aa	Known RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	ZNF641	Q96N77	438 aa	Predicted RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	ASPSCR1	Q9BZE9	553 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	ATP13A3	Q9H7F0	1226 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	PDF	Q9HBH1	243 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	PHPT1	Q9NRX4	125 aa	Predicted RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	B4GALT6	Q9UBX8	382 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	KLHL3	Q9UH77	587 aa		7.83	□□□□□ -1.16
NVL-223	ENST00000496393	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.83	□□□□□ -1.16
NVL-223	ENST00000496393	PES1	O00541	588 aa	Known RBP	7.82	□□□□□ -1.16
NVL-223	ENST00000496393	CAPN5	O15484	640 aa	Predicted RBP	7.82	□□□□□ -1.16
NVL-223	ENST00000496393	ZW10	O43264	779 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	CEACAM5	P06731	702 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	HOXC4	P09017	264 aa	Predicted RBP	7.82	□□□□□ -1.16
NVL-223	ENST00000496393	PRKCSH	P14314	528 aa	Predicted RBP	7.82	□□□□□ -1.16
NVL-223	ENST00000496393	F8A1	P23610	371 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	TRIM23	P36406	574 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	ADCY8	P40145	1251 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	GPR3	P46089	330 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	CD97	P48960	835 aa		7.82	□□□□□ -1.16
NVL-223	ENST00000496393	YBEY	P58557	167 aa	Predicted RBP	7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms