RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CSRP3P50461 194 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 EPHB3P54753 998 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 ZNF268Q14587 947 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 TMEM132DQ14C87 1099 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 TBR1Q16650 682 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ITPRIPL2Q3MIP1 535 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC39A12Q504Y0 691 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC45A4Q5BKX6 768 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 AGBL4Q5VU57 503 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 KRT79Q5XKE5 535 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ARL6IP4Q66PJ3 421 aaKnown RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 ANKS6Q68DC2 871 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 PLAG1Q6DJT9 500 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 TRMT10BQ6PF06 316 aaKnown RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 HAUS6Q7Z4H7 955 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 USP37Q86T82 979 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 GPBP1Q86WP2 473 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 AGBL5Q8NDL9 886 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 TMIEQ8NEW7 156 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 CSGALNACT1Q8TDX6 532 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 RLN3Q8WXF3 142 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC7A6OSQ96CW6 309 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 SENP8Q96LD8 212 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ZNF512Q96ME7 567 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC22A12Q96S37 553 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 GPHA2Q96T91 129 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SEPT5Q99719 369 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 CHCHD6Q9BRQ6 235 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SPATA5L1Q9BVQ7 753 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 GTPBP2Q9BX10 602 aaKnown RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 STRA6Q9BX79 667 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC46A2Q9BY10 475 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 FGFBP2Q9BYJ0 223 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 RAB34Q9BZG1 259 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 GPR88Q9GZN0 384 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 MS4A7Q9GZW8 240 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 PCDH18Q9HCL0 1135 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 HEYLQ9NQ87 328 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 TMLHEQ9NVH6 421 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 XPR1Q9UBH6 696 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 IL17BQ9UHF5 180 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 TBX20Q9UMR3 447 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC8A2Q9UPR5 921 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 DERAQ9Y315 318 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 C2CD2Q9Y426 696 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ASB3Q9Y575 518 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 STYXL1Q9Y6J8 313 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SHROOM3Q8TF72 1996 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 VWA3AA6NCI4 1184 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 RAB27BO00194 218 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TRDMT1O14717 391 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 ACTL6BO94805 426 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 FGF19O95750 216 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 OLFM2O95897 454 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 JUNP05412 331 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 ITGA2BP08514 1039 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ZNF888P0CJ79 500 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 SCP2P22307 547 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 RRM1P23921 792 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ADSSP30520 456 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ACOT2P49753 483 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ZNF135P52742 658 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 DCAF7P61962 342 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 ZXDBP98169 803 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 GTF2BQ00403 316 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 APBA1Q02410 837 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 MESP2Q0VG99 397 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 MYO1EQ12965 1108 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 BOP1Q14137 746 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 MTF1Q14872 753 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 KYAT1Q16773 422 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 MGAT5BQ3V5L5 792 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ZC2HC1CQ53FD0 456 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 RILPL1Q5EBL4 403 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 AGAP9Q5VTM2 703 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 WSCD1Q658N2 575 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ZNF529Q6P280 563 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 DSTYKQ6XUX3 929 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 LIMS2Q7Z4I7 341 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 KCTD20Q7Z5Y7 419 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ADGRE4PQ86SQ3 457 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 ITIH5Q86UX2 942 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SFR1Q86XK3 245 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 GATAD2AQ86YP4 633 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SLC44A2Q8IWA5 706 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 SFTPA1Q8IWL2 248 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 BRSK2Q8IWQ3 736 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TP53INP2Q8IXH6 220 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 YAF2Q8IY57 180 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 CMTM8Q8IZV2 173 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 PDCL2Q8N4E4 241 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 DEFB119Q8N690 84 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SPPL2BQ8TCT7 592 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms